RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 FAM20BO75063 409 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 OTX1P32242 354 aaPredicted RBP12.55□□□□□ -0.4
LINC00593-202ENST00000560853 CD200P41217 278 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 GNB2P62879 340 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 EFNB1P98172 346 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 MPPED2Q15777 294 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 PCK2Q16822 640 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 ZNF404Q494X3 552 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 KLF17Q5JT82 389 aaPredicted RBP12.55□□□□□ -0.4
LINC00593-202ENST00000560853 OR8B3Q8NGG8 313 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 ERGIC1Q969X5 290 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 OTULINQ96BN8 352 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 NEIL1Q96FI4 390 aaPredicted RBP12.55□□□□□ -0.4
LINC00593-202ENST00000560853 PLEKHA8Q96JA3 519 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 OR8B2Q96RD0 313 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 KCNJ15Q99712 375 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 ADAT1Q9BUB4 502 aaKnown RBP12.55□□□□□ -0.4
LINC00593-202ENST00000560853 SLC22A4Q9H015 551 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 MED20Q9H944 212 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
LINC00593-202ENST00000560853 FAM183AA6NL82 134 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 ZNF878C9JN71 531 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 HMGN1P05114 100 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 CD80P33681 288 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 HOXA4Q00056 320 aaPredicted RBP12.54□□□□□ -0.4
LINC00593-202ENST00000560853 LRRC36Q1X8D7 754 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 TEX30Q5JUR7 227 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 BTNL3Q6UXE8 466 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 RBMS3Q6XE24 437 aaKnown RBP12.54□□□□□ -0.4
LINC00593-202ENST00000560853 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 Q8TCH9 128 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 HRASLS5Q96KN8 279 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 TOR3AQ9H497 397 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 RIBC2Q9H4K1 309 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 ZNF69Q9UC07 566 aa12.54□□□□□ -0.4
LINC00593-202ENST00000560853 NOP16Q9Y3C1 178 aaKnown RBP12.54□□□□□ -0.4
LINC00593-202ENST00000560853 CPT2P23786 658 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 CFPP27918 469 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 PITPNBP48739 271 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 BLVRAP53004 296 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 PAX8Q06710 450 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 EIF2B1Q14232 305 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 LINC01590Q5TEZ4 76 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 LYPD2Q6UXB3 125 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 DPY19L4Q7Z388 723 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 ERI1Q8IV48 349 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 BCL6BQ8N143 479 aaPredicted RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 OR6N2Q8NGY6 317 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 FN3KRPQ9HA64 309 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 SMPD3Q9NY59 655 aaPredicted RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 MRPL15Q9P015 296 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 ORC6Q9Y5N6 252 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 IGHV2-70DA0A0C4DH43 119 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 SLC16A6O15403 523 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 TBX1O43435 398 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 GMDSO60547 372 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 FSTL3O95633 263 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 ANXA2P07355 339 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 HSD11B1P28845 292 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 SLC15A1P46059 708 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 CX3CR1P49238 355 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 UBA52P62987 128 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 PAX2Q02962 417 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 SFRP4Q6FHJ7 346 aaPredicted RBP12.53□□□□□ -0.4
LINC00593-202ENST00000560853 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 GALNT4Q8N4A0 578 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 RAB40AQ8WXH6 277 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 INTS14Q96SY0 518 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 RNF7Q9UBF6 113 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 CLN8Q9UBY8 286 aa12.53□□□□□ -0.4
LINC00593-202ENST00000560853 TMEM89A2RUT3 159 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 XRCC2O43543 280 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 PRKYO43930 277 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 GRPP07492 148 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 IGHV4-38-2P0DP08 117 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 GSTT1P30711 240 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 COMPP49747 757 aaPredicted RBP12.52□□□□□ -0.41
LINC00593-202ENST00000560853 TIGD6Q17RP2 521 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 DUX5Q96PT3 197 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 ABHD6Q9BV23 337 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.41
LINC00593-202ENST00000560853 OR51V1Q9H2C8 321 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 OPA3Q9H6K4 179 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 DNAJC27Q9NZQ0 273 aa12.52□□□□□ -0.41
LINC00593-202ENST00000560853 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.51□□□□□ -0.41
LINC00593-202ENST00000560853 A6NLC8 198 aa12.51□□□□□ -0.41
LINC00593-202ENST00000560853 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
LINC00593-202ENST00000560853 GLCEO94923 617 aa12.51□□□□□ -0.41
LINC00593-202ENST00000560853 PTBP3O95758 552 aaKnown RBP12.51□□□□□ -0.41
LINC00593-202ENST00000560853 PAICSP22234 425 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms