RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ACKR3P25106 362 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 ALDH3B1P43353 468 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 RAB1AP62820 205 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 RIPPLY1Q0D2K3 151 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 UNC119Q13432 240 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 TNK1Q13470 666 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 UBE2V2Q15819 145 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 PLA1AQ53H76 456 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 AGAP6Q5VW22 663 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 NSUN5P2Q63ZY6 315 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 OR2A2Q6IF42 318 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 TMEM53Q6P2H8 277 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 INO80CQ6PI98 192 aaPredicted RBP11.22□□□□□ -0.61
SNX1-211ENST00000560829 OR2AE1Q8NHA4 323 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 AKAP1Q92667 903 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNX1-211ENST00000560829 GCDHQ92947 438 aaPredicted RBP11.22□□□□□ -0.61
SNX1-211ENST00000560829 ITFG2Q969R8 447 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 BOD1Q96IK1 185 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 C1orf147Q96MC9 270 aaPredicted RBP11.22□□□□□ -0.61
SNX1-211ENST00000560829 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 ATG5Q9H1Y0 275 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 NOX3Q9HBY0 568 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 NPAP1Q9NZP6 1156 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 NLKQ9UBE8 527 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 NCOA6Q14686 2063 aaPredicted RBP11.21□□□□□ -0.61
SNX1-211ENST00000560829 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 hCG_38984A0A1B0GV85 526 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 HCKP08631 526 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 UBBP0CG47 229 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 EDN3P14138 238 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 AP3S2P59780 193 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 OR8B8Q15620 311 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
SNX1-211ENST00000560829 TMEM42Q69YG0 159 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 RAB12Q6IQ22 244 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 CRIP3Q6Q6R5 217 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 OR2W3Q7Z3T1 314 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 C9orf106Q8NAJ2 232 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 OR5M9Q8NGP3 310 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 OR6K3Q8NGY3 331 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 NANOS1Q8WY41 292 aaKnown RBP11.21□□□□□ -0.61
SNX1-211ENST00000560829 SPSB1Q96BD6 273 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 GPR137Q96N19 417 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 NUDT16L1Q9BRJ7 211 aaKnown RBP11.21□□□□□ -0.61
SNX1-211ENST00000560829 GHRLQ9UBU3 117 aa11.21□□□□□ -0.61
SNX1-211ENST00000560829 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.61
SNX1-211ENST00000560829 PTPRZ1P23471 2315 aaPredicted RBP11.21□□□□□ -0.61
SNX1-211ENST00000560829 FRYQ5TBA9 3013 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 TRAV18A0A075B6X5 111 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 ANKRD20A5PA0PJZ0 165 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 SULT1C2O00338 296 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 SCGNO76038 276 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 GSTT2BP0CG30 244 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 CD79AP11912 226 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 STOMP27105 288 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 KIR2DL2P43627 348 aaPredicted RBP11.21□□□□□ -0.62
SNX1-211ENST00000560829 FAM3AP98173 230 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 PMPCAQ10713 525 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 SF3B4Q15427 424 aaKnown RBP eCLIP11.21□□□□□ -0.62
SNX1-211ENST00000560829 KISS1Q15726 138 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.62
SNX1-211ENST00000560829 ZBTB37Q5TC79 503 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 AWAT2Q6E213 333 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 OR10K2Q6IF99 312 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 MTFR2Q6P444 385 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 Q6ZT83 130 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 RNF144BQ7Z419 303 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 CREB3L1Q96BA8 519 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 UPRTQ96BW1 309 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 POM121L2Q96KW2 1035 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 KLK11Q9UBX7 282 aa11.21□□□□□ -0.62
SNX1-211ENST00000560829 LAMA5O15230 3695 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 DCHS1Q96JQ0 3298 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 MEIOCA2RUB1 952 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
SNX1-211ENST00000560829 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
SNX1-211ENST00000560829 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
SNX1-211ENST00000560829 H7C417 338 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 ZNHIT1O43257 154 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 HNRNPCP07910 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNX1-211ENST00000560829 NAT2P11245 290 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 PTHLHP12272 177 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 GSK3AP49840 483 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 TGFBR3Q03167 851 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 ZNF92Q03936 586 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 SSBP1Q04837 148 aaKnown RBP11.2□□□□□ -0.62
SNX1-211ENST00000560829 PLP2Q04941 152 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 SNTB2Q13425 540 aaKnown RBP11.2□□□□□ -0.62
SNX1-211ENST00000560829 TBRG1Q3YBR2 411 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 HIKESHIQ53FT3 197 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 GLIPR1L1Q6UWM5 242 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 ZNF584Q8IVC4 421 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 CCDC36Q8IYA8 594 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 GCNT2Q8N0V5 402 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
SNX1-211ENST00000560829 ZNF75AQ96N20 296 aa11.2□□□□□ -0.62
SNX1-211ENST00000560829 SPACA5Q96QH8 159 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms