RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 BOLLQ8N9W6 283 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 DEFB108BQ8NET1 73 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 OR4M2Q8NGB6 313 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 OR8B12Q8NGG6 310 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 OR52H1Q8NGJ2 320 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 TMEM163Q8TC26 289 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 Q8TCH9 128 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 LYZL4Q96KX0 146 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 YIPF3Q9GZM5 350 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 SLC22A4Q9H015 551 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 OR10A2Q9H208 303 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 OPA3Q9H6K4 179 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 RHBDD3Q9Y3P4 386 aa9.75□□□□□ -0.85
RABGGTA-216ENST00000560243 PPIAL4EA0A075B759 164 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 ANKRD30BLA7E2S9 258 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 PPIAL4DF5H284 164 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 C3orf80F5H4A9 247 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 FOXH1O75593 365 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 RGS9O75916 674 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 PPIAL4FP0DN26 164 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 CD80P33681 288 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 DDOSTP39656 456 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 ZNF404Q494X3 552 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 SFRP4Q6FHJ7 346 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 KLBQ86Z14 1044 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 OR11L1Q8NGX0 322 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 PPP1R14AQ96A00 147 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 OSBPL10Q9BXB5 764 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 GABARAPL3Q9BY60 117 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 RIBC2Q9H4K1 309 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 C7orf69Q9H7B7 122 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 SP140LQ9H930 580 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 FN3KRPQ9HA64 309 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 ADGRL4Q9HBW9 690 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 C1orf123Q9NWV4 160 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 PPIAL4AQ9Y536 164 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 TENM1Q9UKZ4 2725 aa9.74□□□□□ -0.85
RABGGTA-216ENST00000560243 A6NLC8 198 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 A8MXK9 166 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 J3QLI3 93 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 APOL3O95236 402 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 IRF2P14316 349 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 CSNK2BP67870 215 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 PAX2Q02962 417 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 ROM1Q03395 351 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 MFGE8Q08431 387 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 POU4F2Q12837 409 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 OR8B8Q15620 311 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 ESCO2Q56NI9 601 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 LCN1P1Q5VSP4 162 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 NXNL2Q5VZ03 156 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 C1QL2Q7Z5L3 287 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 C11orf53Q8IXP5 236 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 C1orf87Q8N0U7 546 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 OR8S1Q8NH09 359 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 TMEM158Q8WZ71 300 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 UBE2FQ969M7 185 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 ERGIC1Q969X5 290 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 OR8B4Q96RC9 309 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 CNN2Q99439 309 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 APOL4Q9BPW4 351 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 PAPOLGQ9BWT3 736 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 PRRG3Q9BZD7 231 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 FGF23Q9GZV9 251 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 FAM206AQ9NX38 181 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 RNF7Q9UBF6 113 aa9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 NOP16Q9Y3C1 178 aaKnown RBP9.73□□□□□ -0.85
RABGGTA-216ENST00000560243 PPIAL4CA0A0B4J2A2 164 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 TMEM269A0A1B0GVZ9 245 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 FSTL3O95633 263 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 FSHBP01225 129 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 ALPLP05186 524 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 ZNF12P17014 697 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 EGR1P18146 543 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 EPHA1P21709 976 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 CFL1P23528 166 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 GATA3P23771 443 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 ELF3P78545 371 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 ZNF154Q13106 437 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 DMRTC1Q5HYR2 192 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 KCTD18Q6PI47 426 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 DEGS2Q6QHC5 323 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 PLEKHG7Q6ZR37 379 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 SSX6Q7RTT6 188 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 SLC35F2Q8IXU6 374 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 GCSAMQ8N6F7 178 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 SPERTQ8NA61 448 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 NEIL1Q96FI4 390 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 TBX5Q99593 518 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 SSBP3Q9BWW4 388 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 MROQ9BYG7 248 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 RGCCQ9H4X1 137 aa9.72□□□□□ -0.85
RABGGTA-216ENST00000560243 NIPAL2Q9H841 368 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms