RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ITFG2Q969R8 447 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 DIRC2Q96SL1 478 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 ERVK-18Q9QC07 812 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 ZDHHC8Q9ULC8 765 aa18.45■□□□□ 0.54
SNX1-206ENST00000559389 LOC390937A0A1W2PQ73 354 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 P2RY10O00398 339 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 MYL12BO14950 172 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 MLNRO43193 412 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 NCR1O76036 304 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 CD55P08174 381 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 UBCP0CG48 685 aaKnown RBP18.44■□□□□ 0.54
SNX1-206ENST00000559389 ATP6V1B1P15313 513 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 MAGEB1P43366 347 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 ART1P52961 327 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 ALKBH1Q13686 389 aaKnown RBP18.44■□□□□ 0.54
SNX1-206ENST00000559389 IRF3Q14653 427 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 FAM209AQ5JX71 171 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 Q6ZSR3 168 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 KRTAP1-3Q8IUG1 177 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 CSNK2A3Q8NEV1 391 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 OR13G1Q8NGZ3 307 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 RPS4Y2Q8TD47 263 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 ELMOD3Q96FG2 381 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 FAM71F1Q96KD3 344 aaPredicted RBP18.44■□□□□ 0.54
SNX1-206ENST00000559389 MRPL15Q9P015 296 aaKnown RBP18.44■□□□□ 0.54
SNX1-206ENST00000559389 NAV2Q8IVL1 2488 aa18.44■□□□□ 0.54
SNX1-206ENST00000559389 SETXQ7Z333 2677 aaKnown RBP18.43■□□□□ 0.54
SNX1-206ENST00000559389 OR4C45A6NMZ5 311 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 RGS10O43665 173 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 DHRS3O75911 302 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 LY6HO94772 140 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 F12P00748 615 aaPredicted RBP18.43■□□□□ 0.54
SNX1-206ENST00000559389 WNT4P56705 351 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 GABARAPL2P60520 117 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 ODF4Q2M2E3 257 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 XAF1Q6GPH4 301 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 DOK3Q7L591 496 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 KLBQ86Z14 1044 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 OR2Z1Q8NG97 314 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 OR10AD1Q8NGE0 317 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 SLC22A4Q9H015 551 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 ERGIC3Q9Y282 383 aa18.43■□□□□ 0.54
SNX1-206ENST00000559389 USF3Q68DE3 2245 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 LRBAP50851 2863 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 LOC107986453A0A1B0GWG9 222 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 MTRF1O75570 445 aaKnown RBP18.42■□□□□ 0.54
SNX1-206ENST00000559389 LALBAP00709 142 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 MT-ND2P03891 347 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 MAP2K3P46734 347 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 GTF2A1P52655 376 aaPredicted RBP18.42■□□□□ 0.54
SNX1-206ENST00000559389 CCL8P80075 99 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 DOC2BQ14184 412 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 CDK5R1Q15078 307 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 TSTQ16762 297 aaKnown RBP18.42■□□□□ 0.54
SNX1-206ENST00000559389 CCDC58Q4VC31 144 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 Q5PR19 223 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 PRSS48Q7RTY5 328 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 FTMTQ8N4E7 242 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 NANOGP1Q8N7R0 232 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 GATAD2BQ8WXI9 593 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 ADAT1Q9BUB4 502 aaKnown RBP18.42■□□□□ 0.54
SNX1-206ENST00000559389 MND1Q9BWT6 205 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 TRIM36Q9NQ86 728 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 TMEM100Q9NV29 134 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 BABAM2Q9NXR7 383 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 NOP16Q9Y3C1 178 aaKnown RBP18.42■□□□□ 0.54
SNX1-206ENST00000559389 LRRC42Q9Y546 428 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 V9GYS6 101 aa18.42■□□□□ 0.54
SNX1-206ENST00000559389 A0A1B0GVI7 797 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 DHRS7CA6NNS2 312 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 ANKRD30BLA7E2S9 258 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 H0YL77 283 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 HPXP02790 462 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 ISG15P05161 165 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 CA6P23280 308 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 TNFAIP6P98066 277 aaPredicted RBP18.41■□□□□ 0.54
SNX1-206ENST00000559389 KRT74Q7RTS7 529 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 SEMA6DQ8NFY4 1073 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 OR14K1Q8NGZ2 314 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 PAPOLGQ9BWT3 736 aaKnown RBP18.41■□□□□ 0.54
SNX1-206ENST00000559389 YTHDF1Q9BYJ9 559 aaKnown RBP18.41■□□□□ 0.54
SNX1-206ENST00000559389 SAP30LQ9HAJ7 183 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 ITGB1BP2Q9UKP3 347 aa18.41■□□□□ 0.54
SNX1-206ENST00000559389 CSMD2Q7Z408 3487 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 TMEM212A6NML5 194 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 SYT7O43581 403 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 SSX4O60224 188 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 ZFPL1O95159 310 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 CST4P01036 141 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 HLA-DPB1P04440 258 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 ACHEP22303 614 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 TNFSF4P23510 183 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 TESK1Q15569 626 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 ZBTB37Q5TC79 503 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 TMEM244Q5VVB8 128 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 SHEQ5VZ18 495 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 RPL22L1Q6P5R6 122 aaKnown RBP18.4■□□□□ 0.54
SNX1-206ENST00000559389 PRSS57Q6UWY2 283 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 CCDC54Q8NEL0 328 aa18.4■□□□□ 0.54
SNX1-206ENST00000559389 MYOZ1Q9NP98 299 aaPredicted RBP18.4■□□□□ 0.54
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