RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 MOGAT2Q3SYC2 334 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 SCGB2B2Q4G0G5 96 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 NHLRC3Q5JS37 347 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 TOR2AQ5JU69 321 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 ATPAF1Q5TC12 328 aaPredicted RBP6.42□□□□□ -1.38
VPS13C-206ENST00000558338 PRAMEF20Q5VT98 475 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 RAET1LQ5VY80 246 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 RTL6Q6ICC9 239 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 RFPL4BQ6ZWI9 263 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 TMED4Q7Z7H5 227 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 LYG2Q86SG7 212 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 SLC25A42Q86VD7 318 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 STEAP2Q8NFT2 490 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 OR56B1Q8NGI3 324 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 OR2Y1Q8NGV0 311 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 C17orf50Q8WW18 174 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 CPNE2Q96FN4 548 aaPredicted RBP6.42□□□□□ -1.38
VPS13C-206ENST00000558338 PGAM5Q96HS1 289 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM41AQ96HV5 264 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 SCGB3A2Q96PL1 93 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 GAL3ST1Q99999 423 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 PIGQQ9BRB3 760 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM59Q9BXS4 323 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 FXYD6Q9H0Q3 95 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 CST11Q9H112 138 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 PNRC2Q9NPJ4 139 aaKnown RBP6.42□□□□□ -1.38
VPS13C-206ENST00000558338 GPR84Q9NQS5 396 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 HPF1Q9NWY4 346 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 COMMD9Q9P000 198 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 NUP50Q9UKX7 468 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 ANAPC10Q9UM13 185 aa6.42□□□□□ -1.38
VPS13C-206ENST00000558338 NOP16Q9Y3C1 178 aaKnown RBP6.42□□□□□ -1.38
VPS13C-206ENST00000558338 MTRF1O75570 445 aaKnown RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CBR3O75828 277 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 STK17BO94768 372 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CRYZL1O95825 349 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 HLA-AP01891 365 aaKnown RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 GP1BAP07359 652 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 UMODP07911 640 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 TDGF1P13385 188 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ICAM2P13598 275 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF28P17035 718 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 HLA-GP17693 338 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CALCRP30988 508 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CDAP32320 146 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CASRP41180 1078 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 PRKXP51817 358 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SUCLG1P53597 346 aaKnown RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 MLF1P58340 268 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CXADRP78310 365 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 H3F3AP84243 136 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ECH1Q13011 328 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 DHRS2Q13268 280 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF345Q14585 488 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 HLXQ14774 488 aaPredicted RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 OR10K2Q6IF99 312 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM65Q6PI78 240 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 GLIPR1L1Q6UWM5 242 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 GSG1LQ6UXU4 331 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 FAM57BQ71RH2 274 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SLC51BQ86UW2 128 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 NAA40Q86UY6 237 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ANGPTL5Q86XS5 388 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 MAML2Q8IZL2 1156 aaPredicted RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 BEST3Q8N1M1 668 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ARMC10Q8N2F6 343 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 PAQR4Q8N4S7 273 aaPredicted RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 TMEM156Q8N614 296 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 OR13C8Q8NGS7 320 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 KCNE4Q8WWG9 221 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 PP6455Q8WZ26 134 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SPTSSAQ969W0 71 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 NTNG2Q96CW9 530 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 FAM71F1Q96KD3 344 aaPredicted RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 GPER1Q99527 375 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 PHB2Q99623 299 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SLC6A7Q99884 636 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SF3B5Q9BWJ5 86 aaKnown RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ARL6Q9H0F7 186 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF160Q9HCG1 818 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SH2D2AQ9NP31 389 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 FARSAQ9Y285 508 aaKnown RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 FLVCR1Q9Y5Y0 555 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 HS3ST3B1Q9Y662 390 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 hCG_1807616A0A1W2PRN6 198 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 OR14I1A6ND48 311 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ZNF814B7Z6K7 855 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 I3L521 148 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 CDC14BO60729 498 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 DHRS3O75911 302 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 OR2F2O95006 317 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 IGLV3-1P01715 115 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 FCER2P06734 321 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SLC25A4P12235 298 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 PRF1P14222 555 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 HIST1H1DP16402 221 aaKnown RBP6.41□□□□□ -1.38
VPS13C-206ENST00000558338 M6PRP20645 277 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 TNFSF4P23510 183 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 SRD5A2P31213 254 aa6.41□□□□□ -1.38
VPS13C-206ENST00000558338 ALDH3B1P43353 468 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms