RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MS4A10Q96PG2 267 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 ZNF346Q9UL40 294 aaKnown RBP12.64□□□□□ -0.39
SPG11-210ENST00000558319 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 GPR12P47775 334 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 TM4SF4P48230 202 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 MEOX2P50222 304 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 DERL3Q96Q80 235 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 IKZF5Q9H5V7 419 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 SLC22A13Q9Y226 551 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
SPG11-210ENST00000558319 ERVS71-1P61550 626 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 INSM1Q01101 510 aaPredicted RBP12.64□□□□□ -0.39
SPG11-210ENST00000558319 GPNMBQ14956 572 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.64□□□□□ -0.39
SPG11-210ENST00000558319 C11orf40Q8WZ69 217 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 LRFN3Q9BTN0 628 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 R4GN57 208 aa12.64□□□□□ -0.39
SPG11-210ENST00000558319 A0A087X0M5 115 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 A0A1B0GX30 115 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 OR5AL1P0C617 328 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 PTHLHP12272 177 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 GFRALQ6UXV0 394 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 DOK3Q7L591 496 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 PHYHIPQ92561 330 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 AKIRIN1Q9H9L7 192 aaPredicted RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 C2CD4DB7Z1M9 353 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 B4GALT1P15291 398 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 POU3F3P20264 500 aaPredicted RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 SULT1A2P50226 295 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 NKAIN1Q4KMZ8 207 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 TMEM207Q6UWW9 146 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 Q6ZN92 141 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 Q6ZS52 159 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 RTN4RL1Q86UN2 441 aaPredicted RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 FAM26EQ8N5C1 309 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 NAT8BQ9UHF3 227 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 COX5AP20674 150 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 RBP2P50120 134 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 RPS19BP1Q86WX3 136 aaKnown RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 OR2A1Q8NGT9 310 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 TIMD4Q96H15 378 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 NAGKQ9UJ70 344 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 NUP188Q5SRE5 1749 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 CXCL13O43927 109 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 COX7A2P2O60397 106 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 CCL2P13500 99 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 CLDN15P56746 228 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 ZNF154Q13106 437 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 PLXDC2Q6UX71 529 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 ZNF573Q86YE8 665 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 SLAMF6Q96DU3 332 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 NEURL2Q9BR09 285 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 LIN7CQ9NUP9 197 aaKnown RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 NPPBP16860 134 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 ZNF25P17030 456 aaPredicted RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 IL3RAP26951 378 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 TOMM34Q15785 309 aaPredicted RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 STAC2Q6ZMT1 411 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 MAFAQ8NHW3 353 aaPredicted RBP12.63□□□□□ -0.39
SPG11-210ENST00000558319 PROCRQ9UNN8 238 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 TIMM9Q9Y5J7 89 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 YPEL5P62699 121 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 C11orf87Q6NUJ2 197 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 SLC46A1Q96NT5 459 aa12.63□□□□□ -0.39
SPG11-210ENST00000558319 ST6GAL1P15907 406 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 ETV3LQ6ZN32 361 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 UBE3DQ7Z6J8 389 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 WDR31Q8NA23 367 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 ZNF485Q8NCK3 441 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 UBE2ZQ9H832 354 aaPredicted RBP12.62□□□□□ -0.39
SPG11-210ENST00000558319 IGKV3-7A0A075B6H7 116 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 H3BVH4 76 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 ZNF205O95201 554 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 NOVA1P51513 510 aaKnown RBP12.62□□□□□ -0.39
SPG11-210ENST00000558319 GPM6AP51674 278 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 CD300CQ08708 224 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 SLC48A1Q6P1K1 146 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 DGAT2L6Q6ZPD8 337 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 SCPEP1Q9HB40 452 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 HMGN4O00479 90 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 C9orf50Q5SZB4 431 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 THEM4Q5T1C6 240 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 MZB1Q8WU39 189 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 IL17BQ9UHF5 180 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 USP3Q9Y6I4 520 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 IFITM5A6NNB3 132 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 IL2RAP01589 272 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms