RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 PNPP00491 289 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 ATP6V1B1P15313 513 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 GIFP27352 417 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 DCKP27707 260 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 VHLP40337 213 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 MAP2K3P46734 347 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 SRP9P49458 86 aaKnown RBP14.21□□□□□ -0.13
PBX4-202ENST00000557978 OR8B8Q15620 311 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 C6orf52Q5T4I8 152 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 BCL2L15Q5TBC7 163 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 LHFPL3Q86UP9 236 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 COMMD2Q86X83 199 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 SPERTQ8NA61 448 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 OR52I1Q8NGK6 324 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 OR2V2Q96R30 315 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 G6PC2Q9NQR9 355 aa14.21□□□□□ -0.13
PBX4-202ENST00000557978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.2□□□□□ -0.14
PBX4-202ENST00000557978 RNF223E7ERA6 249 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 LYNX1G3V0Z9 82 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 CDC14BO60729 498 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 LILRA1O75019 489 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 FAM20BO75063 409 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 MTRF1O75570 445 aaKnown RBP14.2□□□□□ -0.14
PBX4-202ENST00000557978 TTRP02766 147 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 LYNX1P0DP58 116 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 CA6P23280 308 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 SLC3A1Q07837 685 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 MFGE8Q08431 387 aaPredicted RBP14.2□□□□□ -0.14
PBX4-202ENST00000557978 MZT1Q08AG7 82 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 MED21Q13503 144 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 RIN1Q13671 783 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 OR8G1Q15617 311 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 TP53I3Q53FA7 332 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 IZUMO2Q6UXV1 221 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 ELMOD2Q8IZ81 293 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 CELF2-AS1Q8N7Q2 184 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 OR10AD1Q8NGE0 317 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 FBLIM1Q8WUP2 373 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 RORBQ92753 470 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 ALG8Q9BVK2 526 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 JAM3Q9BX67 310 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 ERVK13-1Q9NX77 482 aa14.2□□□□□ -0.14
PBX4-202ENST00000557978 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.19□□□□□ -0.14
PBX4-202ENST00000557978 VWC2LB2RUY7 222 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 H0YL77 283 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 HLA-DPB1P04440 258 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 NR4A2P43354 598 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 CSNK2BP67870 215 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 CATSPERDQ86XM0 798 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 SYS1Q8N2H4 156 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 OR51E1Q8TCB6 317 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 HAVCR2Q8TDQ0 301 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 ITLN1Q8WWA0 313 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 CCL17Q92583 94 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 YIPF5Q969M3 257 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 LYZL4Q96KX0 146 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 ADAT1Q9BUB4 502 aaKnown RBP14.19□□□□□ -0.14
PBX4-202ENST00000557978 GPR84Q9NQS5 396 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 ZNF275Q9NSD4 429 aaPredicted RBP14.19□□□□□ -0.14
PBX4-202ENST00000557978 PLCXD1Q9NUJ7 323 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 ACOXLQ9NUZ1 547 aa14.19□□□□□ -0.14
PBX4-202ENST00000557978 EFCAB10A6NFE3 127 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 F5H5P2 479 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 J3QLW9 94 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 IFNL4K9M1U5 179 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 RP2O75695 350 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 IGLV3-1P01715 115 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 INHBBP09529 407 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 PIPP12273 146 aaPredicted RBP14.18□□□□□ -0.14
PBX4-202ENST00000557978 ZNF19P17023 458 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 GNALP38405 381 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 CD200P41217 278 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 GPR6P46095 362 aaPredicted RBP14.18□□□□□ -0.14
PBX4-202ENST00000557978 OR12D2P58182 307 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 MRPL28Q13084 256 aaKnown RBP14.18□□□□□ -0.14
PBX4-202ENST00000557978 ERGIC1Q969X5 290 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 PPP1R14AQ96A00 147 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 TMEM80Q96HE8 168 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 MEGF10Q96KG7 1140 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 COX4I2Q96KJ9 171 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 BPESC1Q9GZL8 116 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 ABCB9Q9NP78 766 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 CHCHD3Q9NX63 227 aaKnown RBP14.18□□□□□ -0.14
PBX4-202ENST00000557978 CNOT2Q9NZN8 540 aaKnown RBP14.18□□□□□ -0.14
PBX4-202ENST00000557978 PPP1R3CQ9UQK1 317 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 MPC1Q9Y5U8 109 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 CSPG4Q6UVK1 2322 aa14.18□□□□□ -0.14
PBX4-202ENST00000557978 CLDN25C9JDP6 229 aa14.17□□□□□ -0.14
PBX4-202ENST00000557978 SMAD7O15105 426 aaKnown RBP14.17□□□□□ -0.14
PBX4-202ENST00000557978 PPIHO43447 177 aaKnown RBP14.17□□□□□ -0.14
PBX4-202ENST00000557978 DHRS3O75911 302 aa14.17□□□□□ -0.14
PBX4-202ENST00000557978 HTR1AP08908 422 aa14.17□□□□□ -0.14
PBX4-202ENST00000557978 MYL12AP19105 171 aa14.17□□□□□ -0.14
PBX4-202ENST00000557978 USF1P22415 310 aaPredicted RBP14.17□□□□□ -0.14
PBX4-202ENST00000557978 LOXL1Q08397 574 aaPredicted RBP14.17□□□□□ -0.14
PBX4-202ENST00000557978 RIPPLY1Q0D2K3 151 aa14.17□□□□□ -0.14
PBX4-202ENST00000557978 DOK3Q7L591 496 aa14.17□□□□□ -0.14
PBX4-202ENST00000557978 PEG10Q86TG7 708 aaKnown RBP14.17□□□□□ -0.14
PBX4-202ENST00000557978 CIARTQ8N365 385 aaPredicted RBP14.17□□□□□ -0.14
PBX4-202ENST00000557978 BPIFB6Q8NFQ5 453 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms