RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 BPIFB6Q8NFQ5 453 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 C4orf36Q96KX1 117 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
USP3-205ENST00000557884 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 REG4Q9BYZ8 158 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 BPESC1Q9GZL8 116 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 MOB1AQ9H8S9 216 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 FGF20Q9NP95 211 aaPredicted RBP12.16□□□□□ -0.46
USP3-205ENST00000557884 ERVK13-1Q9NX77 482 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 ZANQ9Y493 2812 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 A0A0U1RQV5 110 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ANKRD30BLA7E2S9 258 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 H3BSH0 61 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 P2RY10O00398 339 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 RP2O75695 350 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 TTRP02766 147 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ACHEP22303 614 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 GALEQ14376 348 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 CATSPERDQ86XM0 798 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ELMOD2Q8IZ81 293 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 PRSS35Q8N3Z0 413 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 FBLIM1Q8WUP2 373 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 CCL17Q92583 94 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 GGHQ92820 318 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.46
USP3-205ENST00000557884 MEGF10Q96KG7 1140 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ZNF649Q9BS31 505 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ISG20L2Q9H9L3 353 aaKnown RBP12.15□□□□□ -0.46
USP3-205ENST00000557884 CHODLQ9H9P2 273 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 INPP5EQ9NRR6 644 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ZNF275Q9NSD4 429 aaPredicted RBP12.15□□□□□ -0.46
USP3-205ENST00000557884 MRPL15Q9P015 296 aaKnown RBP12.15□□□□□ -0.46
USP3-205ENST00000557884 RHBDD3Q9Y3P4 386 aa12.15□□□□□ -0.46
USP3-205ENST00000557884 ACANP16112 2415 aa12.15□□□□□ -0.47
USP3-205ENST00000557884 F8P00451 2351 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 NDUFS8O00217 210 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 PPIHO43447 177 aaKnown RBP12.14□□□□□ -0.47
USP3-205ENST00000557884 TACSTD2P09758 323 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 LIMS3P0CW19 117 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 LIMS4P0CW20 117 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 SLC25A16P16260 332 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 DCKP27707 260 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 DDOSTP39656 456 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 CRYBB2P43320 205 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 NR4A2P43354 598 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 HSPA13P48723 471 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 SRP9P49458 86 aaKnown RBP12.14□□□□□ -0.47
USP3-205ENST00000557884 ETV1P50549 477 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 ACTA2P62736 377 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 ACTG2P63267 376 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 MRPS11P82912 194 aaKnown RBP12.14□□□□□ -0.47
USP3-205ENST00000557884 RIN1Q13671 783 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 OR8B8Q15620 311 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 WDR38Q5JTN6 314 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 CSNK2A3Q8NEV1 391 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
USP3-205ENST00000557884 COX4I2Q96KJ9 171 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 PAPOLGQ9BWT3 736 aaKnown RBP12.14□□□□□ -0.47
USP3-205ENST00000557884 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 DCAF16Q9NXF7 216 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 IL19Q9UHD0 177 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 ZNF391Q9UJN7 358 aa12.14□□□□□ -0.47
USP3-205ENST00000557884 A0A096LNT2 108 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 IGHV4-61A0A0C4DH41 118 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 A0A1B0GWJ7 208 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 IRGMA1A4Y4 181 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 EFCAB10A6NFE3 127 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 IGLV3-1P01715 115 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 TNFRSF1AP19438 455 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 MYF6P23409 242 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 GIFP27352 417 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 GNALP38405 381 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 GPR6P46095 362 aaPredicted RBP12.13□□□□□ -0.47
USP3-205ENST00000557884 MVKQ03426 396 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 HFEQ30201 348 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 C6orf141Q5SZD1 244 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 AVPI1Q5T686 147 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 PRAMEF6Q5VXH4 476 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 AHSA2Q719I0 299 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 KCTD20Q7Z5Y7 419 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 OR2G2Q8NGZ5 317 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 PIGCQ92535 297 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 TMEM80Q96HE8 168 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 CNBD2Q96M20 576 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 SLC22A4Q9H015 551 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 NARFLQ9H6Q4 476 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 CLEC2DQ9UHP7 191 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 DIMT1Q9UNQ2 313 aaKnown RBP12.13□□□□□ -0.47
USP3-205ENST00000557884 PPP1R3CQ9UQK1 317 aa12.13□□□□□ -0.47
USP3-205ENST00000557884 NOP16Q9Y3C1 178 aaKnown RBP12.13□□□□□ -0.47
USP3-205ENST00000557884 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
USP3-205ENST00000557884 A0A1B0GTI1 187 aa12.12□□□□□ -0.47
USP3-205ENST00000557884 A0A1B0GVI7 797 aa12.12□□□□□ -0.47
USP3-205ENST00000557884 A6NIN4 97 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms