RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 COPS4Q9BT78 406 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 OPA3Q9H6K4 179 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 RNPEPL1Q9HAU8 725 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 IL20Q9NYY1 176 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 CD300AQ9UGN4 299 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 MAGEL2Q9UJ55 1249 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 CDH10Q9Y6N8 788 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 COMMD3-BMI1R4GMX3 469 aa13.14□□□□□ -0.31
SCFD1-224ENST00000557713 NOTCH1P46531 2555 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 A0A1B0GW55 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 hCG_1807616A0A1W2PRN6 198 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-224ENST00000557713 XRCC2O43543 280 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L2P0CJ85 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L3P0CJ86 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L4P0CJ87 422 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L5P0CJ88 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L6P0CJ89 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L7P0CJ90 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 MUC1P15941 1255 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-224ENST00000557713 MSX2P35548 267 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-224ENST00000557713 ELF3P78545 371 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-224ENST00000557713 FAM3AP98173 230 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 TAF9Q16594 264 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 TEX30Q5JUR7 227 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 RPL13AP3Q6NVV1 102 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4L9Q6RFH8 374 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-224ENST00000557713 Q6ZSV7 163 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 LNX2Q8N448 690 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 ZNF511Q8NB15 262 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 OR52L1Q8NGH7 329 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 ST8SIA4Q92187 359 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 SGK3Q96BR1 496 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DMRTB1Q96MA1 342 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 CCL13Q99616 98 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 C16orf95Q9H693 158 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 CENPMQ9NSP4 180 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 DUX4Q9UBX2 424 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 N6AMT1Q9Y5N5 214 aa13.13□□□□□ -0.31
SCFD1-224ENST00000557713 A0A1B0GVI7 797 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 ANKRD30BLA7E2S9 258 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-224ENST00000557713 KRT36O76013 467 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 SPARCP09486 303 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 FMO3P31513 532 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 GRK5P34947 590 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 ENTPD1P49961 510 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 TAF13Q15543 124 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 MICBQ29980 383 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 ZNF770Q6IQ21 691 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-224ENST00000557713 METAP1DQ6UB28 335 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-224ENST00000557713 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 SLC16A9Q7RTY1 509 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 OR1M1Q8NGA1 313 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 OR8D4Q8NGM9 314 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 OR9Q1Q8NGQ5 310 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 ELAC2Q9BQ52 826 aaKnown RBP13.12□□□□□ -0.31
SCFD1-224ENST00000557713 BTBD10Q9BSF8 475 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 DPAGT1Q9H3H5 408 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 LYVE1Q9Y5Y7 322 aa13.12□□□□□ -0.31
SCFD1-224ENST00000557713 SLC22A31A6NKX4 558 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 ZNF878C9JN71 531 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 ARPC2O15144 300 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 GASTP01350 101 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 GYPBP06028 91 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 AMY2BP19961 511 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 TGM4P49221 684 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 CRMP1Q14194 572 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 RASSF6Q6ZTQ3 369 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 PRSS45Q7RTY3 260 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 LINC00471Q8N535 108 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 NPRL2Q8WTW4 380 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 SEH1LQ96EE3 360 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 PPP1R3EQ9H7J1 279 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 TCF7L1Q9HCS4 588 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 FAM96BQ9Y3D0 163 aa13.11□□□□□ -0.31
SCFD1-224ENST00000557713 DHRS12A0PJE2 317 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 GPR37O15354 613 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 TBX1O43435 398 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 SPI1P17947 270 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 SLC25A1P53007 311 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
SCFD1-224ENST00000557713 CSNK2BP67870 215 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 KLHL12Q53G59 568 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 SAMD4BQ5PRF9 694 aaKnown RBP13.1□□□□□ -0.31
SCFD1-224ENST00000557713 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
SCFD1-224ENST00000557713 SLC36A1Q7Z2H8 476 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 FAM216BQ8N7L0 139 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 Q8N7P7 452 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 LRTOMTQ8WZ04 291 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 UBE2FQ969M7 185 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms