RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TMEM244Q5VVB8 128 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 DOK3Q7L591 496 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 SSX6Q7RTT6 188 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 CATSPERDQ86XM0 798 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 OR2AE1Q8NHA4 323 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 RORBQ92753 470 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 MYDGFQ969H8 173 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 TBX5Q99593 518 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 ALG8Q9BVK2 526 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 MSL2Q9HCI7 577 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 BRD7Q9NPI1 651 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 C14orf119Q9NWQ9 140 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 PSORS1C1Q9UIG5 152 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 GNG8Q9UK08 70 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 MYRFQ9Y2G1 1151 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 TPRKBQ9Y3C4 175 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 F8P00451 2351 aa11.64□□□□□ -0.55
SHMT2-234ENST00000557703 IGHV1-69-2A0A0G2JMI3 117 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ZSCAN5BA6NJL1 495 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 PRR32B1ATL7 298 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 PSMD9O00233 223 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 TPD52L2O43399 206 aaKnown RBP11.63□□□□□ -0.55
SHMT2-234ENST00000557703 SPRY3O43610 288 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 DHRS3O75911 302 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 APOL3O95236 402 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 PNPP00491 289 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 TTRP02766 147 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 GNALP38405 381 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 CD200P41217 278 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 TGM4P49221 684 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 GBX2P52951 348 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ST3GAL4Q11206 333 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 SMN1Q16637 294 aaKnown RBP11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ALKBH6Q3KRA9 238 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 Q6ZR03 302 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ZCCHC24Q8N2G6 241 aaKnown RBP11.63□□□□□ -0.55
SHMT2-234ENST00000557703 OR2Z1Q8NG97 314 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 OR56B2PQ8NGI1 322 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 OR52N1Q8NH53 320 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 C10orf105Q8TEF2 133 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 GGHQ92820 318 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 TECTBQ96PL2 329 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF649Q9BS31 505 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 TPK1Q9H3S4 243 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF319Q9P2F9 582 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 AASSQ9UDR5 926 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 BLOC1S6Q9UL45 172 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 PCDHGB5Q9Y5G0 923 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 N6AMT1Q9Y5N5 214 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 HIVEP1P15822 2718 aa11.63□□□□□ -0.55
SHMT2-234ENST00000557703 ACANP16112 2415 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF816-ZNF321PA0A0X1KG74 233 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 TMEM212A6NML5 194 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 ANXA2P2A6NMY6 339 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 DENRO43583 198 aaKnown RBP11.62□□□□□ -0.55
SHMT2-234ENST00000557703 HPXP02790 462 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 HTR1AP08908 422 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 LIMS3P0CW19 117 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 LIMS4P0CW20 117 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 MAGEB1P43366 347 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 CDH15P55291 814 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 OR12D2P58182 307 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 TAS2R43P59537 309 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 LOXL1Q08397 574 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-234ENST00000557703 RIN1Q13671 783 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 OR8G1Q15617 311 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 TMEM255AQ5JRV8 349 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 PEG10Q86TG7 708 aaKnown RBP11.62□□□□□ -0.55
SHMT2-234ENST00000557703 LHFPL3Q86UP9 236 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 C1orf87Q8N0U7 546 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 OR5AS1Q8N127 324 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 STX19Q8N4C7 294 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 KLHL36Q8N4N3 616 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 RFLNBQ8N5W9 214 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF525Q8N782 197 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 WFDC11Q8NEX6 87 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 OR2G2Q8NGZ5 317 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 HPS1Q92902 700 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 TIMD4Q96H15 378 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 Q96MF0 132 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 YTHDF1Q9BYJ9 559 aaKnown RBP11.62□□□□□ -0.55
SHMT2-234ENST00000557703 GPR84Q9NQS5 396 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 FKBP14Q9NWM8 211 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 SLC22A13Q9Y226 551 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 ERGIC3Q9Y282 383 aa11.62□□□□□ -0.55
SHMT2-234ENST00000557703 A0A1B0GVI7 797 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 LRRC30A6NM36 301 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 VWC2LB2RUY7 222 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 J3QLW9 94 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 MRPS14O60783 128 aaKnown RBP11.61□□□□□ -0.55
SHMT2-234ENST00000557703 RPP14O95059 124 aaKnown RBP11.61□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF19P17023 458 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 NR4A2P43354 598 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 TP53I3Q53FA7 332 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 RBM48Q5RL73 367 aaKnown RBP11.61□□□□□ -0.55
SHMT2-234ENST00000557703 COMMD2Q86X83 199 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 BHLHE23Q8NDY6 225 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms