RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 KLF8O95600 359 aaPredicted RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 MOSP00540 346 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 IFNA14P01570 189 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 HPNP05981 417 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 EIF4EP06730 217 aaKnown RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 IGHV3-43DP0DP04 118 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF7P17097 686 aaPredicted RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 PSMC3P17980 439 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 GABRR1P24046 479 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 IVDP26440 423 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 HLA-DMAP28067 261 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 CEACAM3P40198 252 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 MAGEA6P43360 314 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 DNASE1L1P49184 302 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 RGS6P49758 472 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 CAV2P51636 162 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 XKP51811 444 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 RAP1GDS1P52306 607 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 CLDN6P56747 220 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 RIPPLY3P57055 190 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 TIMM10P62072 90 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ARF6P62330 175 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 GUCA2BQ16661 112 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 IMPG1Q17R60 797 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 C5orf64Q2M2E5 130 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 NDUFAF6Q330K2 333 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 SLC36A2Q495M3 483 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 COX19Q49B96 90 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 AKIRIN2Q53H80 203 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 IDNKQ5T6J7 187 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 UBE2UQ5VVX9 321 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ANKRD22Q5VYY1 191 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF544Q6NX49 715 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 BAIAP2L2Q6UXY1 529 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 MBOAT2Q6ZWT7 520 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ABHD13Q7L211 337 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 SSX7Q7RTT5 188 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 SSX6Q7RTT6 188 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 OR2W3Q7Z3T1 314 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 HORMAD1Q86X24 394 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 TGIF2LYQ8IUE0 185 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 CCNYL1Q8N7R7 359 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF738Q8NE65 137 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 DUSP18Q8NEJ0 188 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 NOXO1Q8NFA2 376 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 OR5D18Q8NGL1 313 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 OR5M1Q8NGP8 315 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 OR6K2Q8NGY2 324 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 OR8D1Q8WZ84 308 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 CDS1Q92903 461 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 TMEM230Q96A57 120 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 C16orf74Q96GX8 76 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 RSG1Q9BU20 258 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF426Q9BUY5 554 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 SIRT7Q9NRC8 400 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 C1orf109Q9NX04 203 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 TAS2R9Q9NYW1 312 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 TAS2R7Q9NYW3 318 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF629Q9UEG4 869 aaPredicted RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 STOML2Q9UJZ1 356 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 POLR3HQ9Y535 204 aaPredicted RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 HEBP2Q9Y5Z4 205 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 F11RQ9Y624 299 aaKnown RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 BCORL1Q5H9F3 1711 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RIMS1Q86UR5 1692 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 IGLV1-36A0A0B4J1U3 117 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ARGFXA6NJG6 315 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 FAM166BA8MTA8 275 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 CLDN34H7C241 214 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 PRMT5O14744 637 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 KMOO15229 486 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ERI3O43414 337 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 GATCO43716 136 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 FAM189A1O60320 539 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 NPIPB7O75200 414 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RDH16O75452 317 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 TNNC2P02585 160 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 FABP1P07148 127 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 HOXC4P09017 264 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 TACSTD2P09758 323 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 OR5H8P0DN80 308 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 GABRG2P18507 467 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 MT3P25713 68 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ARR3P36575 388 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RBM34P42696 430 aaKnown RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 GNG10P50151 68 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 NUP107P57740 925 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RAB4BP61018 213 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 UBE2KP61086 200 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 IGLV3-21P80748 117 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 SEMG2Q02383 582 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 NAB1Q13506 487 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF266Q14584 549 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 HERPUD1Q15011 391 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 PDK2Q15119 407 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 PON3Q15166 354 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF630Q2M218 657 aaPredicted RBP2.26□□□□□ -2.05
TRAV28-201ENST00000557548 RFX4Q33E94 735 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 PIGGQ5H8A4 983 aa2.26□□□□□ -2.05
TRAV28-201ENST00000557548 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms