RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ZNF35P13682 527 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ZNF3P17036 446 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 HOXB6P17509 224 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 GLRXP35754 106 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 RPS27P42677 84 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ALDH3B1P43353 468 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 MAGEA2P43356 314 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 DAPP51397 102 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 CRISP1P54107 249 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 FXYD6P3P58550 94 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ERVS71-1P61550 626 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 PPP1CBP62140 327 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 RPS23P62266 143 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 SCRN3Q0VDG4 424 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 CRMP1Q14194 572 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 EIF2B1Q14232 305 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ENDOGQ14249 297 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 MAD2L1BPQ15013 274 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ADIPOQQ15848 244 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 C1QTNF12Q5T7M4 302 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 SHEQ5VZ18 495 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ZNF770Q6IQ21 691 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ACSM5Q6NUN0 579 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ZNF544Q6NX49 715 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 SLC27A4Q6P1M0 643 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ACSM6Q6P461 480 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 PLBD1Q6P4A8 553 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 SHQ1Q6PI26 577 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 CLEC2AQ6UVW9 174 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ZNF620Q6ZNG0 422 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 FAM122BQ7Z309 247 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ADCK1Q86TW2 530 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 TGIF2LYQ8IUE0 185 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ERI1Q8IV48 349 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 CPOQ8IVL8 374 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 PAQR4Q8N4S7 273 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 SLC37A3Q8NCC5 494 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 NPEPL1Q8NDH3 523 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 GJC3Q8NFK1 279 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 OR52L2PQ8NGH6 319 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 OR8D4Q8NGM9 314 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 OR2T4Q8NH00 348 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 OR4Q3Q8NH05 313 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 OSR1Q8TAX0 266 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 SLC25A40Q8TBP6 338 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 NABP1Q96AH0 204 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 CMBLQ96DG6 245 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 C4orf45Q96LM5 186 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 DGCR6LQ9BY27 220 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 WNT5BQ9H1J7 359 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 C1orf198Q9H425 327 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 RIBC2Q9H4K1 309 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ELOVL3Q9HB03 270 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 PAPOLBQ9NRJ5 636 aaKnown RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 DECR2Q9NUI1 292 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 IL20Q9NYY1 176 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 TREM2Q9NZC2 230 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 PTTG3PQ9NZH4 202 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 ZNF224Q9NZL3 707 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 CRNNQ9UBG3 495 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-237ENST00000556274 BAIAP2Q9UQB8 552 aa3.98□□□□□ -1.77
ATXN3-237ENST00000556274 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 NPIPB13A6NJU9 1138 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 NPIPB4C9JG80 1138 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 M0R233 179 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 BHLHE40O14503 412 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 ARPC3O15145 178 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 SPRY3O43610 288 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 SYNGR3O43761 229 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 TLX2O43763 284 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-237ENST00000556274 MGRN1O60291 552 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 TXNDC12O95881 172 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 NGFP01138 241 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 IGHV4-39P01824 125 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 TFP02787 698 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
ATXN3-237ENST00000556274 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-237ENST00000556274 DAOP14920 347 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 HSD11B1P28845 292 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 GRK5P34947 590 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 PDLIM4P50479 330 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 PRKXP51817 358 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 EFNA4P52798 201 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 HCCSP53701 268 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-237ENST00000556274 LSM6P62312 80 aaKnown RBP3.97□□□□□ -1.77
ATXN3-237ENST00000556274 CCL8P80075 99 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 TNK1Q13470 666 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 AQP6Q13520 282 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 RIPK1Q13546 671 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 APOFQ13790 326 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 GGTLC2Q14390 218 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 GK3PQ14409 553 aa3.97□□□□□ -1.77
ATXN3-237ENST00000556274 PTGES3Q15185 160 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms