RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ASB3Q9Y575 518 aa0.66□□□□□ -2.3
SRP54-207ENST00000555535 PRRC2BQ5JSZ5 2229 aaKnown RBP0.66□□□□□ -2.3
SRP54-207ENST00000555535 TRPM6Q9BX84 2022 aa0.65□□□□□ -2.3
SRP54-207ENST00000555535 AKNAQ7Z591 1439 aa0.65□□□□□ -2.3
SRP54-207ENST00000555535 GBF1Q92538 1859 aa0.65□□□□□ -2.3
SRP54-207ENST00000555535 LOC102724200A0A096LPH7 203 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 GOLGA8OA6NCC3 632 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 E7EQL1 145 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 GOLGA8NF8WBI6 632 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 HUS1O60921 280 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CIB2O75838 187 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CD160O95971 181 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 PGA4P0DJD7 388 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 PGA3P0DJD8 388 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 PGA5P0DJD9 388 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 GABRG2P18507 467 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 USF1P22415 310 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 HLA-DMAP28067 261 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 MPV17P39210 176 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 RFC3P40938 356 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ACOT2P49753 483 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 KLF3P57682 345 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 LIPEQ05469 1076 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 FMODQ06828 376 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 BTN1A1Q13410 526 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 NAB1Q13506 487 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 MAD2L1BPQ15013 274 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 SLC9A3R2Q15599 337 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 KLHL40Q2TBA0 621 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 KRTAP21-3Q3LHN1 58 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 LIN9Q5TKA1 542 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ZNF660Q6AZW8 331 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 TTC23LQ6PF05 361 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CD300LGQ6UXG3 332 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 C16orf47Q6ZP98 133 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 RTL4Q6ZR62 310 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 PDPNQ86YL7 162 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CBLN2Q8IUK8 224 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 BBS7Q8IWZ6 715 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 OR4M2Q8NGB6 313 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 OR9G4Q8NGQ1 327 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 OR10G6Q8NH81 332 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 OR5K2Q8NHB8 316 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 MUC7Q8TAX7 377 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 FAM81AQ8TBF8 368 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 DCAKDQ8WVC6 231 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ELMO1Q92556 727 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 IGF2BP2-AS1Q96M15 143 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CSPG4P5Q96PW8 444 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 KCNS3Q9BQ31 491 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CHCHD7Q9BUK0 85 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 C1orf50Q9BV19 199 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ANKRD60Q9BZ19 345 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 PKIBQ9C010 78 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ILKAPQ9H0C8 392 aaPredicted RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 RACGAP1Q9H0H5 632 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 PIGUQ9H490 435 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 DUSP21Q9H596 190 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 VSIRQ9H7M9 311 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 CCNB1IP1Q9NPC3 277 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 TMEM100Q9NV29 134 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 RBFOX1Q9NWB1 397 aaKnown RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 COX16Q9P0S2 106 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ZNF492Q9P255 531 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 RAB22AQ9UL26 194 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 RAB23Q9ULC3 237 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 SLC17A4Q9Y2C5 497 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 NINLQ9Y2I6 1382 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 RPRD2Q5VT52 1461 aaKnown RBP0.65□□□□□ -2.31
SRP54-207ENST00000555535 OTOFQ9HC10 1997 aa0.65□□□□□ -2.31
SRP54-207ENST00000555535 ADGRA3Q8IWK6 1321 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 C4orf51C9J302 202 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 C9JVG2 144 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 SCAMP2O15127 329 aaKnown RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 WBP4O75554 376 aaKnown RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 SCELO95171 688 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 PTTG1O95997 202 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 IGLV2-8P01709 118 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 ASGR1P07306 291 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 KRT16P08779 473 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CLTAP09496 248 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CT45A6P0DMU7 189 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CT45A5P0DMU8 189 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CT45A7P0DMV0 189 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 MYL9P24844 172 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 APLNRP35414 380 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 TNNT2P45379 298 aaPredicted RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 GZMMP51124 257 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 RAB10P61026 200 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 PPP1CAP62136 330 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 IFITM3Q01628 133 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 BIKQ13323 160 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 TRMT5Q32P41 509 aaKnown RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 C6orf99Q4VX62 202 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CEP55Q53EZ4 464 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CT45A1Q5HYN5 189 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 TMEM69Q5SWH9 247 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 CCDC183Q5T5S1 534 aa0.64□□□□□ -2.31
SRP54-207ENST00000555535 TWF2Q6IBS0 349 aaKnown RBP0.64□□□□□ -2.31
SRP54-207ENST00000555535 CERS6Q6ZMG9 384 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms