RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ZNF121P58317 390 aaPredicted RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 BPIFB3P59826 476 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 ESRRGP62508 458 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 OR8B8Q15620 311 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 MPPED2Q15777 294 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 ARMCX4Q5H9R4 360 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 CD276Q5ZPR3 534 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 C9orf139Q6ZV77 190 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 KRT74Q7RTS7 529 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 SLC16A9Q7RTY1 509 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 CPOQ8IVL8 374 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 OR5K1Q8NHB7 308 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 OTULINQ96BN8 352 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 SGK3Q96BR1 496 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 UPRTQ96BW1 309 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 DUS3LQ96G46 650 aaKnown RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 REEP6Q96HR9 211 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 PRRG3Q9BZD7 231 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 YIPF3Q9GZM5 350 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 OR51V1Q9H2C8 321 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 ZMAT3Q9HA38 289 aaKnown RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 RNPEPL1Q9HAU8 725 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 PAPOLBQ9NRJ5 636 aaKnown RBP9.89□□□□□ -0.83
VRK1-204ENST00000555351 CLN8Q9UBY8 286 aa9.89□□□□□ -0.83
VRK1-204ENST00000555351 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 TNFRSF13BO14836 293 aaPredicted RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 TBX1O43435 398 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 LHBP01229 141 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 LIPFP07098 398 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 SLC2A1P11166 492 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 ALOX5APP20292 161 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 PRKACGP22612 351 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 CD80P33681 288 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 GSK3AP49840 483 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 PRSS12P56730 875 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 SRSF2Q01130 221 aaKnown RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 IL5RAQ01344 420 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 HNRNPA0Q13151 305 aaKnown RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 ATP6AP1Q15904 470 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 PRAMEF6Q5VXH4 476 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 WDR25Q64LD2 544 aaPredicted RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 KCTD18Q6PI47 426 aaPredicted RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 RBMS3Q6XE24 437 aaKnown RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 ZNF841Q6ZN19 808 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 ZNF771Q7L3S4 317 aaPredicted RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 DOK3Q7L591 496 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 HS3ST5Q8IZT8 346 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 ZMYND19Q96E35 227 aaPredicted RBP9.88□□□□□ -0.83
VRK1-204ENST00000555351 DMRTB1Q96MA1 342 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 AMELYQ99218 206 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 TEAD3Q99594 435 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 UFSP2Q9NUQ7 469 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 KIF17Q9P2E2 1029 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 KAAG1Q9UBP8 84 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 ENOPH1Q9UHY7 261 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 MPC1Q9Y5U8 109 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 TMEM14AQ9Y6G1 99 aa9.88□□□□□ -0.83
VRK1-204ENST00000555351 IGHV3-64DA0A0J9YX35 117 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 TMEM89A2RUT3 159 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 OOEPA6NGQ2 149 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 ZNF254O75437 659 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 ZNF205O95201 554 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 FCGR1AP12314 374 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 ATP6V1B1P15313 513 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 MUC1P15941 1255 aaPredicted RBP9.87□□□□□ -0.83
VRK1-204ENST00000555351 ANOS1P23352 680 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 GNALP38405 381 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 NAA10P41227 235 aaPredicted RBP9.87□□□□□ -0.83
VRK1-204ENST00000555351 PSMA6P60900 246 aaKnown RBP9.87□□□□□ -0.83
VRK1-204ENST00000555351 ROM1Q03395 351 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 PTGES3Q15185 160 aaKnown RBP9.87□□□□□ -0.83
VRK1-204ENST00000555351 SNAPC1Q16533 368 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 KLHL12Q53G59 568 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 KLF17Q5JT82 389 aaPredicted RBP9.87□□□□□ -0.83
VRK1-204ENST00000555351 LCN1P1Q5VSP4 162 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 TEX36Q5VZQ5 186 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 FAM57BQ71RH2 274 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 SPATC1Q76KD6 591 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 GALNT4Q8N4A0 578 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.87□□□□□ -0.83
VRK1-204ENST00000555351 OR8S1Q8NH09 359 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 THEM6Q8WUY1 208 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 ASB17Q8WXJ9 295 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 PGAM5Q96HS1 289 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 MNTQ99583 582 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 SLC6A7Q99884 636 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 OSBPL10Q9BXB5 764 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 TLNRD1Q9H1K6 362 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 C1orf123Q9NWV4 160 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 ERVK-18Q9QC07 812 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 LAMP5Q9UJQ1 280 aa9.87□□□□□ -0.83
VRK1-204ENST00000555351 WNK2Q9Y3S1 2297 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 A0A0U1RQV5 110 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 TMEM210A6NLX4 147 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 ANXA2P2A6NMY6 339 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 G3V2T6 193 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 GPR37O15354 613 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 ENSAO43768 121 aaKnown RBP9.86□□□□□ -0.83
VRK1-204ENST00000555351 SELENOFO60613 162 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms