RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SGK3Q96BR1 496 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 TBX5Q99593 518 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 MOB1AQ9H8S9 216 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 LPAR2Q9HBW0 351 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 TMEM160Q9NX00 188 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 COPS3Q9UNS2 423 aa10.22□□□□□ -0.77
SRP54-206ENST00000555317 hCG_38984A0A1B0GV85 526 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 A6NLC8 198 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 MPZL2O60487 215 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 APOL3O95236 402 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 MSMBP08118 114 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 OR2T7P0C7T2 308 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 HOXB4P17483 251 aaPredicted RBP10.21□□□□□ -0.77
SRP54-206ENST00000555317 ANOS1P23352 680 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 DCTDP32321 178 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 MDH2P40926 338 aaKnown RBP10.21□□□□□ -0.77
SRP54-206ENST00000555317 GATA4P43694 442 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 SNRPGP62308 76 aaKnown RBP10.21□□□□□ -0.77
SRP54-206ENST00000555317 FAM3AP98173 230 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 EGR3Q06889 387 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 RCN1Q15293 331 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 BCL2L15Q5TBC7 163 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 PRSS45Q7RTY3 260 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 FAM220AQ7Z4H9 259 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 YIPF7Q8N8F6 280 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 OR8B12Q8NGG6 310 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 OR2T27Q8NH04 317 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 ZNF420Q8TAQ5 688 aaPredicted RBP10.21□□□□□ -0.77
SRP54-206ENST00000555317 DVL3Q92997 716 aaPredicted RBP10.21□□□□□ -0.77
SRP54-206ENST00000555317 POM121Q96HA1 1249 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 Q96MT0 163 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 MBOAT4Q96T53 435 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 SOX7Q9BT81 388 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 PBOV1Q9GZY1 135 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 ABCB9Q9NP78 766 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 UFSP2Q9NUQ7 469 aa10.21□□□□□ -0.77
SRP54-206ENST00000555317 ATRQ13535 2644 aa10.21□□□□□ -0.78
SRP54-206ENST00000555317 A0A0U1RQV5 110 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 A0A1B0GWJ7 208 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 hCG_1807616A0A1W2PRN6 198 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 FAM157AC9JC47 383 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 LOC110117498-PIK3R3F6TDL0 507 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 TMEM178BH3BS89 294 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 ENTPD6O75354 484 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 CYB5R3P00387 301 aaPredicted RBP10.2□□□□□ -0.78
SRP54-206ENST00000555317 IGHV2-70P01814 119 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 IGHV2-5P01817 119 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 GRPP07492 148 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 MTNR1AP48039 350 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 DVL1P1P54792 670 aaPredicted RBP10.2□□□□□ -0.78
SRP54-206ENST00000555317 LMO4P61968 165 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 ACTC1P68032 377 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 ACTA1P68133 377 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 IL5RAQ01344 420 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 TMEM155Q4W5P6 130 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 PRAMEF6Q5VXH4 476 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 THAP5Q7Z6K1 395 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 GALNT4Q8N4A0 578 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 RFLNBQ8N5W9 214 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 PLPP7Q8NBV4 271 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 TMEM186Q96B77 213 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 RNFT2Q96EX2 444 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 MRPL48Q96GC5 212 aaKnown RBP10.2□□□□□ -0.78
SRP54-206ENST00000555317 C1orf159Q96HA4 380 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 RDH12Q96NR8 316 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 HIST1H2AAQ96QV6 131 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 MYCBPQ99417 103 aaPredicted RBP10.2□□□□□ -0.78
SRP54-206ENST00000555317 SLC29A1Q99808 456 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 APOL4Q9BPW4 351 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 MICU1Q9BPX6 476 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 MXRA5Q9NR99 2828 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 HIF1ANQ9NWT6 349 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 FAM206AQ9NX38 181 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 DCAF16Q9NXF7 216 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 SMPD3Q9NY59 655 aaPredicted RBP10.2□□□□□ -0.78
SRP54-206ENST00000555317 METRNQ9UJH8 293 aa10.2□□□□□ -0.78
SRP54-206ENST00000555317 DOCK11Q5JSL3 2073 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 TRAV20A0A0B4J274 112 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 LOC100130705A0A1B0GUX0 176 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 A0A1W2PQL4 384 aaPredicted RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 FAM20BO75063 409 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 MTRF1O75570 445 aaKnown RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 RPP14O95059 124 aaKnown RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 IFNA2P01563 188 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 SRD5A1P18405 259 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 SRP14P37108 136 aaKnown RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 MAP2K3P46734 347 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 MAB21L1Q13394 359 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 ZMYND11Q15326 602 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 OR8B8Q15620 311 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 KCNJ8Q15842 424 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 OCLNQ16625 522 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 LRRC36Q1X8D7 754 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 ZNF181Q2M3W8 571 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 CR1LQ2VPA4 569 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 SLC25A30Q5SVS4 291 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 FAM120AOSQ5T036 256 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 PLEKHG7Q6ZR37 379 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms