RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 FAM189A2Q15884 450 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF239Q16600 458 aaKnown RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 PCK2Q16822 640 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 PLPPR5Q32ZL2 321 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 SLC36A2Q495M3 483 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 METTL11BQ5VVY1 283 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF782Q6ZMW2 699 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 RHOUQ7L0Q8 258 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 YRDCQ86U90 279 aaKnown RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 CATSPERDQ86XM0 798 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 UEVLDQ8IX04 471 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 UBE2J2Q8N2K1 259 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 MAPK1IP1LQ8NDC0 245 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 HSD17B8Q92506 261 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 TMEM41AQ96HV5 264 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 RNF170Q96K19 258 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 KCNK17Q96T54 332 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ABHD6Q9BV23 337 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 OR11A1Q9GZK7 315 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 C20orf85Q9H1P6 137 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ACKR4Q9NPB9 350 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 MRPL22Q9NWU5 206 aaKnown RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 SLCO1C1Q9NYB5 712 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 KLHL13Q9P2N7 655 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 OR5V1Q9UGF6 321 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF107Q9UII5 783 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 CLEC4AQ9UMR7 237 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 LRP12Q9Y561 859 aa9.75□□□□□ -0.85
SHMT2-216ENST00000554975 YLPM1P49750 1951 aaKnown RBP9.75□□□□□ -0.85
SHMT2-216ENST00000554975 ANKRD20A5PA0PJZ0 165 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 PSMD9O00233 223 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 XRCC3O43542 346 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 TGM6O95932 706 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 F12P00748 615 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 ERCC1P07992 297 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 GSTT2P0CG29 244 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 TCEA1P23193 301 aaKnown RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 TIMP3P35625 211 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 NKX2-5P52952 324 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 MELKQ14680 651 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 WIPI1Q5MNZ9 446 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 THEM4Q5T1C6 240 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 BCL2L15Q5TBC7 163 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 OR5M10Q6IEU7 315 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF767PQ75MW2 155 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 FCRLAQ7L513 359 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 ADGRE4PQ86SQ3 457 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 GLB1L2Q8IW92 636 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 PRSS35Q8N3Z0 413 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 ASB13Q8WXK3 278 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 TMEM158Q8WZ71 300 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 PTX4Q96A99 478 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 DACT3Q96B18 629 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 DMRTB1Q96MA1 342 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 GFI1Q99684 422 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 CCL19Q99731 98 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 PIGQQ9BRB3 760 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 SLCO5A1Q9H2Y9 848 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 GHITMQ9H3K2 345 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 SCPEP1Q9HB40 452 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 PAQR5Q9NXK6 330 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-216ENST00000554975 GTF2A1LQ9UNN4 478 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 VDAC3Q9Y277 283 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 POLR1DQ9Y2S0 133 aa9.74□□□□□ -0.85
SHMT2-216ENST00000554975 LOC102725191A0A1B0GVB3 256 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 DEFB108AA8MXU0 73 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 LANCL1O43813 399 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 IL2RAP01589 272 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 HPNP05981 417 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 H2BFMP0C1H6 154 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 IFNGR1P15260 489 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 ZNF17P17021 662 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 PSMB1P20618 241 aaKnown RBP9.73□□□□□ -0.85
SHMT2-216ENST00000554975 GIFP27352 417 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 PTGDSP41222 190 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 CLRN1P58418 232 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 PSMA6P60900 246 aaKnown RBP9.73□□□□□ -0.85
SHMT2-216ENST00000554975 SLC35A1P78382 337 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 FOXF2Q12947 444 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 RBMS2Q15434 407 aaKnown RBP9.73□□□□□ -0.85
SHMT2-216ENST00000554975 OR7E24Q6IFN5 339 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 RAB12Q6IQ22 244 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 ANKRD16Q6P6B7 361 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-216ENST00000554975 CDH26Q8IXH8 852 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 FADS6Q8N9I5 356 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 OR2M3Q8NG83 312 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 OR14L1PQ8NHC6 308 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 GIMAP1Q8WWP7 306 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 PIGTQ969N2 578 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 FYTTD1Q96QD9 318 aaKnown RBP9.73□□□□□ -0.85
SHMT2-216ENST00000554975 TMEM246Q9BRR3 403 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 AUNIPQ9H7T9 357 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 UBTD1Q9HAC8 227 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 UPB1Q9UBR1 384 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 DKKL1Q9UK85 242 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 FBXL3Q9UKT7 428 aa9.73□□□□□ -0.85
SHMT2-216ENST00000554975 RCE1Q9Y256 329 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms