RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 E9PLN8 166 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ARPC1BO15143 372 aaKnown RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 PNPP00491 289 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 GIPP09681 153 aaPredicted RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 PRSS3P35030 304 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 VEGFCP49767 419 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 CARD18P57730 90 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ACTBP60709 375 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 SNRPD2P62316 118 aaKnown RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 ACTG1P63261 375 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ZNF239Q16600 458 aaKnown RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 NSUN5P2Q63ZY6 315 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 ZNF626Q68DY1 528 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 TEX261Q6UWH6 196 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 HDDC2Q7Z4H3 204 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 CDH26Q8IXH8 852 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 NKAIN3Q8N8D7 197 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 NAXEQ8NCW5 288 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 VKORC1Q9BQB6 163 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 MRPL15Q9P015 296 aaKnown RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 ING1Q9UK53 422 aaPredicted RBP15.25■□□□□ 0.03
SHOX-204ENST00000554971 U3KQ87 197 aa15.25■□□□□ 0.03
SHOX-204ENST00000554971 IGHV3-15A0A0B4J1V0 119 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 J3QKU1 62 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 CCL21O00585 134 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 MELTFP08582 738 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 ITGA5P08648 1049 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 UBCP0CG48 685 aaKnown RBP15.24■□□□□ 0.03
SHOX-204ENST00000554971 GLI4P10075 376 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 ENPP1P22413 925 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 PTGER4P35408 488 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 MMP16P51512 607 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 RAC3P60763 192 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 RAP2BP61225 183 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 TMEM255AQ5JRV8 349 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 C9orf106Q8NAJ2 232 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 OR6N1Q8NGY5 312 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 KLHL13Q9P2N7 655 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 SLC23A1Q9UHI7 598 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 SLC22A13Q9Y226 551 aa15.24■□□□□ 0.03
SHOX-204ENST00000554971 LIPT2A6NK58 231 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 SULT2B1O00204 365 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 RAMP1O60894 148 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 PMS2P2O95744 297 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 AKAIN1P0CW23 69 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 HTR2CP28335 458 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ZP1P60852 638 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 H3F3AP84243 136 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 DHODHQ02127 395 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR7A5Q15622 319 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ETFDHQ16134 617 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 PCGF3Q3KNV8 242 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 C4orf17Q53FE4 359 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 C1orf100Q5SVJ3 147 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR7E24Q6IFN5 339 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 RHOUQ7L0Q8 258 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 BEST4Q8NFU0 473 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR11H4Q8NGC9 324 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR8H1Q8NGG4 311 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ST7LQ8TDW4 575 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 SLC25A28Q96A46 364 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 CCDC120Q96HB5 630 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 RBP7Q96R05 134 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ALX4Q9H161 411 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 CLEC4MQ9H2X3 399 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 CALHM2Q9HA72 323 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 FLVCR2Q9UPI3 526 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 CELSR2Q9HCU4 2923 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ANKHD1Q8IWZ3 2542 aaKnown RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 LOC390937A0A1W2PQ73 354 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 MBD3L4A6NDZ8 208 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 MBD3L3A6NE82 208 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 MBD3L5A6NJ08 208 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 SMAD9O15198 467 aaKnown RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR2A4O95047 310 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 IFNA7P01567 189 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ALDOBP05062 364 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ADORA2A-AS1P86434 159 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 PMPCAQ10713 525 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 MELKQ14680 651 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 NLRC3Q7RTR2 1065 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 UXS1Q8NBZ7 420 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR2T35Q8NGX2 323 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 MBD3L2Q8NHZ7 208 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 RNF133Q8WVZ7 376 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 ROBO4Q8WZ75 1007 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 GCDHQ92947 438 aaPredicted RBP15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR2A7Q96R45 310 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 TMPRSS13Q9BYE2 586 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 OR52A1Q9UKL2 312 aa15.23■□□□□ 0.03
SHOX-204ENST00000554971 TACC2O95359 2948 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 UBE2QL1A1L167 161 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 SLC22A20A6NK97 555 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 NOS1APO75052 506 aaPredicted RBP15.22■□□□□ 0.03
SHOX-204ENST00000554971 HOXD4P09016 255 aaPredicted RBP15.22■□□□□ 0.03
SHOX-204ENST00000554971 RNF224P0DH78 156 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 P2RY4P51582 365 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 CASP6P55212 293 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 THEM4Q5T1C6 240 aa15.22■□□□□ 0.03
SHOX-204ENST00000554971 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms