RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 CLN6Q9NWW5 311 aa11.15□□□□□ -0.62
APEX1-208ENST00000554813 ZNF319Q9P2F9 582 aa11.15□□□□□ -0.62
APEX1-208ENST00000554813 MALRD1Q5VYJ5 2156 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 TANC2Q9HCD6 1990 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 hCG_38984A0A1B0GV85 526 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 PSMD9O00233 223 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 PLPP2O43688 288 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 FSTL3O95633 263 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 BAG2O95816 211 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 SRD5A1P18405 259 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 CPT2P23786 658 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 GNALP38405 381 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 RIDAP52758 137 aaKnown RBP11.14□□□□□ -0.63
APEX1-208ENST00000554813 CXCR4P61073 352 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 ZMYND11Q15326 602 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 ZNF829Q3KNS6 432 aaPredicted RBP11.14□□□□□ -0.63
APEX1-208ENST00000554813 ZIK1Q3SY52 487 aaPredicted RBP11.14□□□□□ -0.63
APEX1-208ENST00000554813 ZNF322Q6U7Q0 402 aaPredicted RBP11.14□□□□□ -0.63
APEX1-208ENST00000554813 ZBTB49Q6ZSB9 765 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 OR51G2Q8NGK0 314 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 OR8S1Q8NH09 359 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 FAM81AQ8TBF8 368 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 Q8TCH9 128 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 UFSP2Q9NUQ7 469 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 IKZF2Q9UKS7 526 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 COPS3Q9UNS2 423 aa11.14□□□□□ -0.63
APEX1-208ENST00000554813 NAV3Q8IVL0 2385 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.631e-7■■□□□ 14.1
APEX1-208ENST00000554813 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
APEX1-208ENST00000554813 GRPP07492 148 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 OR2T7P0C7T2 308 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 PMELP40967 661 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 EGR3Q06889 387 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 HNRNPA0Q13151 305 aaKnown RBP11.13□□□□□ -0.63
APEX1-208ENST00000554813 MPPED2Q15777 294 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 FAHD2BQ6P2I3 314 aaPredicted RBP11.13□□□□□ -0.63
APEX1-208ENST00000554813 ZNF771Q7L3S4 317 aaPredicted RBP11.13□□□□□ -0.63
APEX1-208ENST00000554813 OR8B12Q8NGG6 310 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 OR2T27Q8NH04 317 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 EME1Q96AY2 570 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 FAHD2AQ96GK7 314 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
APEX1-208ENST00000554813 TMEM165Q9HC07 324 aa11.13□□□□□ -0.63
APEX1-208ENST00000554813 PPIAL4EA0A075B759 164 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 A0A0G2JMP0 313 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 A0A0U1RQV5 110 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 A0A0X1KG70 313 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 SNTNA6NMZ2 147 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 PPIAL4DF5H284 164 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 FAM20BO75063 409 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 FOXH1O75593 365 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
APEX1-208ENST00000554813 PPIAL4FP0DN26 164 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 GATA3P23771 443 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 SRP14P37108 136 aaKnown RBP11.12□□□□□ -0.63
APEX1-208ENST00000554813 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
APEX1-208ENST00000554813 MAP2K3P46734 347 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 SNRPGP62308 76 aaKnown RBP11.12□□□□□ -0.63
APEX1-208ENST00000554813 IL5RAQ01344 420 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 OR8B8Q15620 311 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 SLC25A30Q5SVS4 291 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 PRAMEF6Q5VXH4 476 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 MEDAGQ5VYS4 303 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 IL17RELQ6ZVW7 336 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 OR4M2Q8NGB6 313 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 APOL4Q9BPW4 351 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 PAPOLGQ9BWT3 736 aaKnown RBP11.12□□□□□ -0.63
APEX1-208ENST00000554813 TTTY10Q9BZA0 68 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 PBOV1Q9GZY1 135 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 ABCB9Q9NP78 766 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 FAM206AQ9NX38 181 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 RNF7Q9UBF6 113 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.12□□□□□ -0.63
APEX1-208ENST00000554813 RHBDD3Q9Y3P4 386 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 PPIAL4AQ9Y536 164 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 MPC1Q9Y5U8 109 aa11.12□□□□□ -0.63
APEX1-208ENST00000554813 JMJD1CQ15652 2540 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 A6NLC8 198 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 ANXA2P2A6NMY6 339 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 ZNF205O95201 554 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 PNPP00491 289 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 CST4P01036 141 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 KRT8P05787 483 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 LCN2P80188 198 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 OCLNQ16625 522 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 ESCO2Q56NI9 601 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 COMMD2Q86X83 199 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
APEX1-208ENST00000554813 UBE2FQ969M7 185 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 LYZL4Q96KX0 146 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 SLC29A1Q99808 456 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
APEX1-208ENST00000554813 C1orf123Q9NWV4 160 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms