RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PGBD2Q6P3X8 592 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM88Q6PEY1 159 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 DPY19L2P2Q6ZN68 376 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 CPLX4Q7Z7G2 160 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ZER1Q7Z7L7 766 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 KLBQ86Z14 1044 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF101Q8IZC7 436 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 DEFB107AQ8IZN7 70 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM217Q8N7C4 229 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF540Q8NDQ6 660 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 OR4C15Q8NGM1 316 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 OR1J2Q8NGS2 313 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 SYNPRQ8TBG9 265 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 SLC25A40Q8TBP6 338 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 C11orf40Q8WZ69 217 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 NSMCE2Q96MF7 247 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 CDRT15Q96T59 188 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF416Q9BWM5 594 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 NDEL1Q9GZM8 345 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 RACGAP1Q9H0H5 632 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 SYT4Q9H2B2 425 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 LRMDAQ9H2I8 198 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 CHODLQ9H9P2 273 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 IL1RAPQ9NPH3 570 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 HINT3Q9NQE9 182 aaKnown RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 TAAR3PQ9P1P4 343 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 IL20RAQ9UHF4 553 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 AURKCQ9UQB9 309 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 FAM32AQ9Y421 112 aaKnown RBP3.51□□□□□ -1.85
VTI1B-203ENST00000554636 IER3IP1Q9Y5U9 82 aa3.51□□□□□ -1.85
VTI1B-203ENST00000554636 ARHGAP32A7KAX9 2087 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 COL6A5A8TX70 2615 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 C5orf49A4QMS7 147 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR6C6A6NF89 314 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ZSCAN5BA6NJL1 495 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 C12orf71A8MTZ7 269 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 FAM157AC9JC47 383 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 DCTN6O00399 190 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 XKRYO14609 159 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ARPC3O15145 178 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 DOK2O60496 412 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 LMX1BO60663 402 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SLC16A7O60669 478 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 GMNNO75496 209 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 KHDRBS3O75525 346 aaKnown RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 GADD45GO95257 159 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 MPZL1O95297 269 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 FAM107AO95990 144 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 NGFP01138 241 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 IFNA2P01563 188 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 IGHV3-13P01766 116 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 FABP3P05413 133 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 LCKP06239 509 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ACAA1P09110 424 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 FAM157CP0CG43 387 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ITGA2P17301 1181 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ACHEP22303 614 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CCNOP22674 350 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CALB2P22676 271 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 RAD52P43351 418 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 GPR6P46095 362 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 HTR5AP47898 357 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 GDI2P50395 445 aaKnown RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ERFP50548 548 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 MMP15P51511 669 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 RPS6KA3P51812 740 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SMIM11AP58511 58 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 PPP1CBP62140 327 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 LSM6P62312 80 aaKnown RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 HIST1H3AP68431 136 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SCRN3Q0VDG4 424 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 AQP6Q13520 282 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 RFX4Q33E94 735 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 KRTAP27-1Q3LI81 207 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CHRFAM7AQ494W8 412 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CCDC92Q53HC0 331 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SPRNQ5BIV9 151 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SPATA46Q5T0L3 261 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 HIST2H3PS2Q5TEC6 136 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF770Q6IQ21 691 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 FAM166AQ6J272 317 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 LCN8Q6JVE9 175 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SMARCD3Q6STE5 483 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF620Q6ZNG0 422 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 RINLQ6ZS11 566 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 IL17RELQ6ZVW7 336 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 HIST2H3AQ71DI3 136 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ADCK1Q86TW2 530 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ZDHHC21Q8IVQ6 265 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ICA1LQ8NDH6 482 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SLC26A10Q8NG04 563 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR9Q2Q8NGE9 314 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR8D4Q8NGM9 314 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR1J1Q8NGS3 322 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR52J3Q8NH60 311 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CLDND2Q8NHS1 167 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 KLF14Q8TD94 323 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 RDH5Q92781 318 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 MCUR1Q96AQ8 359 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 NSL1Q96IY1 281 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms