RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ANOS1P23352 680 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 HILS1P60008 231 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 SEC61A1P61619 476 aaKnown RBP8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 ESRRGP62508 458 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 ZNF154Q13106 437 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 KCNJ8Q15842 424 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 TIGD6Q17RP2 521 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 DCDC5Q6ZRR9 648 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 SLC16A9Q7RTY1 509 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 CPOQ8IVL8 374 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 FTMTQ8N4E7 242 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR8B3Q8NGG8 313 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR56B2PQ8NGI1 322 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR5K1Q8NHB7 308 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 ITFG2Q969R8 447 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 DUS3LQ96G46 650 aaKnown RBP8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR8B2Q96RD0 313 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 JMJD8Q96S16 334 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 AMELYQ99218 206 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 TMEM246Q9BRR3 403 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 SSBP3Q9BWW4 388 aaPredicted RBP8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 SUCNR1Q9BXA5 334 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 PRRG3Q9BZD7 231 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 NIPAL2Q9H841 368 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 PAPOLBQ9NRJ5 636 aaKnown RBP8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 RNF7Q9UBF6 113 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 ZNF391Q9UJN7 358 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 INSIG2Q9Y5U4 225 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 IGHV3-64DA0A0J9YX35 117 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 hCG_38984A0A1B0GV85 526 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 ANKRD30BLA7E2S9 258 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 PHYHO14832 338 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 TBX1O43435 398 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 TIPRLO75663 272 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 VENTXO95231 258 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 FPR2P25090 351 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 RBMXP38159 391 aaKnown RBP8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 CRISP1P54107 249 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 ZNF121P58317 390 aaPredicted RBP8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 GNB2P62879 340 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 FAM3AP98173 230 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 PAX2Q02962 417 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR8B8Q15620 311 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 MPPED2Q15777 294 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 ATP6AP1Q15904 470 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 KLHL12Q53G59 568 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 PRAMEF6Q5VXH4 476 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 DEGS2Q6QHC5 323 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 LRRN1Q6UXK5 716 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 SPATC1Q76KD6 591 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 CSNK2A3Q8NEV1 391 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 DACT3Q96B18 629 aaPredicted RBP8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 SGK3Q96BR1 496 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 ZMYND19Q96E35 227 aaPredicted RBP8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 REEP6Q96HR9 211 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 MRI1Q9BV20 369 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 YIPF3Q9GZM5 350 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR10A2Q9H208 303 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 MMP26Q9NRE1 261 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 ENOPH1Q9UHY7 261 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 AUP1Q9Y679 476 aa8.7□□□□□ -1.02
PTCD2P1-201ENST00000554393 ACOD1A6NK06 481 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 LGALS8O00214 317 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 NDUFA2O43678 99 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 SELENOFO60613 162 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 ZNF205O95201 554 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 FCGR1AP12314 374 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 ALOX5APP20292 161 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 FASP25445 335 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 PSMB10P40306 273 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 PITPNBP48739 271 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 GSK3AP49840 483 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 NPY4RP50391 375 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 DAPP51397 102 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 RPS7P62081 194 aaKnown RBP8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 PAX8Q06710 450 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 SNAPC1Q16533 368 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 ARMCX4Q5H9R4 360 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 LCN1P1Q5VSP4 162 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 TMEM236Q5W0B7 351 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 BTNL3Q6UXE8 466 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 FAM57BQ71RH2 274 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 ZDHHC13Q8IUH4 622 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 BPIFB2Q8N4F0 458 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 BBS1Q8NFJ9 593 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 OR8S1Q8NH09 359 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 THEM6Q8WUY1 208 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 RAB40AQ8WXH6 277 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 DVL3Q92997 716 aaPredicted RBP8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 PGAM5Q96HS1 289 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 GABARAPL1Q9H0R8 117 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 RNPEPL1Q9HAU8 725 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 ABCB9Q9NP78 766 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 KRT84Q9NSB2 600 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 UFSP2Q9NUQ7 469 aa8.69□□□□□ -1.02
PTCD2P1-201ENST00000554393 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms