RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ABHD16AO95870 558 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 IGHV2-5P01817 119 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 MRPL3P09001 348 aaKnown RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 GNAO1P09471 354 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 H2BFMP0C1H6 154 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 ACSM4P0C7M7 580 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 PSKH1P11801 424 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 PIPP12273 146 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CCL2P13500 99 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CCNOP22674 350 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 MYF6P23409 242 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 DCKP27707 260 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 WNT5AP41221 380 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CRYBB2P43320 205 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CDK5R2Q13319 367 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 RSPO1Q2MKA7 263 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 DCAF12L2Q5VW00 463 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 TMEM154Q6P9G4 183 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF322Q6U7Q0 402 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 DRAM2Q6UX65 266 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 LRP11Q86VZ4 500 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF679Q8IYX0 411 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 PAQR4Q8N4S7 273 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 ACBD7Q8N6N7 88 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 SIGLECL1Q8N7X8 197 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 OR5L1Q8NGL2 311 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CNIH3Q8TBE1 160 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 APOBEC3DQ96AK3 386 aaPredicted RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 RAB39BQ96DA2 213 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 LGALS12Q96DT0 336 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 MRPL48Q96GC5 212 aaKnown RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 ZNF799Q96GE5 643 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 OR8B4Q96RC9 309 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 JAM3Q9BX67 310 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 C1QTNF5Q9BXJ0 243 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 MROQ9BYG7 248 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 C7orf69Q9H7B7 122 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CENPMQ9NSP4 180 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 PLCXD1Q9NUJ7 323 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 CNOT2Q9NZN8 540 aaKnown RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 MYEF2Q9P2K5 600 aaKnown RBP6.53□□□□□ -1.36
ABCD4-220ENST00000553998 AASSQ9UDR5 926 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 COPS3Q9UNS2 423 aa6.53□□□□□ -1.36
ABCD4-220ENST00000553998 IGLV3-9A0A075B6K5 115 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 A0A1W2PQL4 384 aaPredicted RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 DNAJC9-AS1A6NH13 148 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 F5H5K5 113 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 DENRO43583 198 aaKnown RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 IGHA1P01876 353 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 DBHP09172 617 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ZFP36P26651 326 aaKnown RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 HSD11B1P28845 292 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 RIDAP52758 137 aaKnown RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 SELENOVP59797 346 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 PPP1CBP62140 327 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 MED21Q13503 144 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 MOGQ16653 247 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF829Q3KNS6 432 aaPredicted RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 PCGF3Q3KNV8 242 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 C6orf141Q5SZD1 244 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF684Q5T5D7 378 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 RGS7BPQ6MZT1 257 aaPredicted RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 RBMS3Q6XE24 437 aaKnown RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 KCTD20Q7Z5Y7 419 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 KRT77Q7Z794 578 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF101Q8IZC7 436 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF283Q8N7M2 679 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 OR10H4Q8NGA5 316 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ABHD4Q8TB40 342 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 HAVCR2Q8TDQ0 301 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 ITFG2Q969R8 447 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 AMELYQ99218 206 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 AMBNQ9NP70 447 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 FGF20Q9NP95 211 aaPredicted RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 KLHDC2Q9Y2U9 406 aa6.52□□□□□ -1.37
ABCD4-220ENST00000553998 POLR3KQ9Y2Y1 108 aaPredicted RBP6.52□□□□□ -1.37
ABCD4-220ENST00000553998 A0A1B0GUS0 222 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 DAPL1A0PJW8 107 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 METTL15A6NJ78 407 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 C17orf100A8MU93 164 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 APOL3O95236 402 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 NGFP01138 241 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 LCATP04180 440 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 KRT8P05787 483 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 LCKP06239 509 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 FAM157BP0CG42 384 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 NAT2P11245 290 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF250P15622 560 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 CFL1P23528 166 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MAGEB1P43366 347 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SLC6A9P48067 706 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 CX3CR1P49238 355 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MMP16P51512 607 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 PRKXP51817 358 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 HCCSP53701 268 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 PSMA6P60900 246 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ACTA2P62736 377 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms