RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 QDPRP09417 244 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 EGR1P18146 543 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 FPR3P25089 353 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 HLA-DMAP28067 261 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 GCH1P30793 250 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 GABRA5P31644 462 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 DDOSTP39656 456 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 COMPP49747 757 aaPredicted RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 ZNF74Q16587 644 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 RPL13AP3Q6NVV1 102 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ZNF613Q6PF04 617 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 CD200R1LQ6Q8B3 271 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 RBMS3Q6XE24 437 aaKnown RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 WDR88Q6ZMY6 472 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 C1QL2Q7Z5L3 287 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 RBM45Q8IUH3 476 aaKnown RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 SNX29P2Q8IUI4 249 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 LRRC18Q8N456 261 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 KLHL36Q8N4N3 616 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 OR6T1Q8NGN1 323 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 OR1J1Q8NGS3 322 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 OR52N1Q8NH53 320 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ZNF519Q8TB69 540 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ACOT11Q8WXI4 607 aaPredicted RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 C22orf15Q8WYQ4 148 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 CCL17Q92583 94 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 RAB1CQ92928 201 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 RNFT2Q96EX2 444 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ELMOD3Q96FG2 381 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ZNF486Q96H40 463 aaPredicted RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 SLC25A44Q96H78 314 aaPredicted RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 WFDC6Q9BQY6 131 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 RSPO3Q9BXY4 272 aaPredicted RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 C7orf69Q9H7B7 122 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 G6PC2Q9NQR9 355 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 INPP5EQ9NRR6 644 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 DDX28Q9NUL7 540 aaKnown RBP7.52□□□□□ -1.21
TDP1-208ENST00000553989 IL20Q9NYY1 176 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 ZNF221Q9UK13 617 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 SLC7A7Q9UM01 511 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 WIPI2Q9Y4P8 454 aa7.52□□□□□ -1.21
TDP1-208ENST00000553989 DYSFO75923 2080 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 A0A087WUU8 490 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 A0A1W2PRG6 482 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 CCDC182A6NF36 153 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 BLOC1S5-TXNDC5H3BN57 136 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 J3QLI3 93 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 FMO6PO60774 539 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 IGHV2-5P01817 119 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 PGA4P0DJD7 388 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 PGA3P0DJD8 388 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 ZNF250P15622 560 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 FPR2P25090 351 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 HTR1FP30939 366 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 ETV1P50549 477 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 ZNF81P51508 661 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 UCP2P55851 309 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 RAB25P57735 213 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 LCN2P80188 198 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 ZP4Q12836 540 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 AWAT1Q58HT5 328 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 SPATA46Q5T0L3 261 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 HACD4Q5VWC8 232 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 LIPKQ5VXJ0 399 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 FAM131AQ6UXB0 335 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 UNQ6126/PRO20091Q6UXV3 157 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 C1orf229Q6ZS94 237 aaPredicted RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 MBOAT2Q6ZWT7 520 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 HDDC2Q7Z4H3 204 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 GID4Q8IVV7 300 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 CPEB3Q8NE35 698 aaKnown RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 C19orf18Q8NEA5 215 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 NOXO1Q8NFA2 376 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 OR4D11Q8NGI4 311 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 ST7LQ8TDW4 575 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 GTF3AQ92664 365 aaKnown RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 MCHR2Q969V1 340 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 DIRAS2Q96HU8 199 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 SDHCQ99643 169 aaPredicted RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 TMPRSS13Q9BYE2 586 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 SRRQ9GZT4 340 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 FN3KQ9H479 309 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 RNF167Q9H6Y7 350 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 NEK6Q9HC98 313 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 POLE4Q9NR33 117 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 MAN2C1Q9NTJ4 1040 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 NKIRAS2Q9NYR9 191 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 TAS2R5Q9NYW4 299 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 RABL2AQ9UBK7 228 aaPredicted RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 EIF3KQ9UBQ5 218 aaKnown RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 RABL2BQ9UNT1 228 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 BAIAP2Q9UQB8 552 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 CAB39Q9Y376 341 aaPredicted RBP7.51□□□□□ -1.21
TDP1-208ENST00000553989 PPIAL4AQ9Y536 164 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 CACNG2Q9Y698 323 aa7.51□□□□□ -1.21
TDP1-208ENST00000553989 A0A1W2PQL4 384 aaPredicted RBP7.5□□□□□ -1.21
TDP1-208ENST00000553989 TRAPPC13A5PLN9 417 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms