RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TROVE2P10155 538 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SLC2A1P11166 492 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 MUC1P15941 1255 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 HIST1H1CP16403 213 aaKnown RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 PAX6P26367 422 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 OTX1P32242 354 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 KIR2DS4P43632 304 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 KLF10Q13118 480 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 NSUN5P1Q3KNT7 163 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SLC36A3Q495N2 470 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 VAX1Q5SQQ9 334 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 C11orf87Q6NUJ2 197 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SMARCD3Q6STE5 483 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 WDR82Q6UXN9 313 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 CBLL1Q75N03 491 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SLC36A1Q7Z2H8 476 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 ZBTB46Q86UZ6 589 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SPERTQ8NA61 448 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 BEND2Q8NDZ0 799 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 OR4C13Q8NGP0 309 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 OR8S1Q8NH09 359 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 OR2T6Q8NHC8 308 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 C8orf46Q8TAG6 207 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 FANK1Q8TC84 345 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 H1FXQ92522 213 aaKnown RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 RORBQ92753 470 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SPTSSAQ969W0 71 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 ATP6V1G3Q96LB4 118 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 SSX3Q99909 188 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 MMP28Q9H239 520 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 RNPEPL1Q9HAU8 725 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 INTS9Q9NV88 658 aaKnown RBP7.41□□□□□ -1.22
SYNE2-209ENST00000553308 C14orf119Q9NWQ9 140 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 MAB21L2Q9Y586 359 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 ENPP4Q9Y6X5 453 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 NBEAL2Q6ZNJ1 2754 aa7.41□□□□□ -1.22
SYNE2-209ENST00000553308 A0A1W2PRQ8 180 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 MEGF11A6BM72 1044 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 OR6C68A6NDL8 312 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 NDUFB3O43676 98 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 XPNPEP2O43895 674 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 CHST1O43916 411 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 VSIG8P0DPA2 414 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 PYCR1P32322 319 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 UBE2E1P51965 193 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 GMFBP60983 142 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 MZT1Q08AG7 82 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 DGCR6Q14129 220 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 LRRC10Q5BKY1 277 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 STUMQ69YW2 141 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 HCP5Q6MZN7 132 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 C11orf88Q6PI97 169 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 CRIP3Q6Q6R5 217 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 LYPD4Q6UWN0 246 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 DRAM2Q6UX65 266 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 DPY19L4Q7Z388 723 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 CYP4Z1Q86W10 505 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 OR1M1Q8NGA1 313 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 OR5T2Q8NGG2 359 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 AJUBAQ96IF1 538 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 CLPTM1LQ96KA5 538 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 DMRTB1Q96MA1 342 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 SIKE1Q9BRV8 207 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 NSRP1Q9H0G5 558 aaKnown RBP7.4□□□□□ -1.22
SYNE2-209ENST00000553308 OR52D1Q9H346 318 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 RANBP3Q9H6Z4 567 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-209ENST00000553308 PPP1R3EQ9H7J1 279 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 SNTG1Q9NSN8 517 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 GID8Q9NWU2 228 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 N6AMT1Q9Y5N5 214 aa7.4□□□□□ -1.22
SYNE2-209ENST00000553308 TVP23AA6NH52 213 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 ANKRD30BLA7E2S9 258 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 ARPC3O15145 178 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 GSTA4O15217 222 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 FBXO24O75426 580 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 DIRAS1O95057 198 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 MPIG6BO95866 241 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 CD28P10747 220 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF823P16415 610 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 SLC6A6P31641 620 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 GRK5P34947 590 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 TGM4P49221 684 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 PRKXP51817 358 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 LIPEQ05469 1076 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 SF3A3Q12874 501 aaKnown RBP eCLIP7.39□□□□□ -1.23
SYNE2-209ENST00000553308 HABP2Q14520 560 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-209ENST00000553308 MAPRE2Q15555 327 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 LRRC75BQ2VPJ9 315 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 ZBTB37Q5TC79 503 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 FOXB2Q5VYV0 432 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 NCR3LG1Q68D85 454 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 SLC15A3Q8IY34 581 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 OR4S1Q8NGB4 309 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 OR51G2Q8NGK0 314 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 OR52J3Q8NH60 311 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 C12orf43Q96C57 262 aaKnown RBP7.39□□□□□ -1.23
SYNE2-209ENST00000553308 RCN3Q96D15 328 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms