RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 PEX13Q92968 403 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 COL21A1Q96P44 957 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 BPIFA3Q9BQP9 254 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 HCAR1Q9BXC0 346 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 SRXN1Q9BYN0 137 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 CXorf21Q9HAI6 301 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 ZCCHC3Q9NUD5 404 aaKnown RBP3.08□□□□□ -1.92
ATXN3-217ENST00000553287 PDP1Q9P0J1 537 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-217ENST00000553287 PLLPQ9Y342 182 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 ASB4Q9Y574 426 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 SOX21Q9Y651 276 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-217ENST00000553287 MAD1L1Q9Y6D9 718 aa3.08□□□□□ -1.92
ATXN3-217ENST00000553287 A0A0J9YW62 118 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 LOC100653049A0A140TA62 436 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 SMIM30A4D0T7 59 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 H7C417 338 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 KRT34O76011 436 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 IGLV1-47P01700 117 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 RHOXF2BP0C7M4 288 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 SLC35E2BP0CK96 405 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF17P17021 662 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF32P17041 273 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 MDKP21741 143 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 TMED10P49755 219 aaKnown RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 EMDP50402 254 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 XKP51811 444 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 RAP1GDS1P52306 607 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 HADHBP55084 474 aaKnown RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 RAG2P55895 527 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 DSCR4P56555 118 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 GPX6P59796 221 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 CHIT1Q13231 466 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 RCN2Q14257 317 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 OR4D1Q15615 310 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 BCL2A1Q16548 175 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 GLYR1Q49A26 553 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 GPAT3Q53EU6 434 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 OTPQ5XKR4 325 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 FAHD2BQ6P2I3 314 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 ATRAIDQ6UW56 229 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 PEX26Q7Z412 305 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 CADM2Q8N3J6 435 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 LRRC17Q8N6Y2 441 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 FADS6Q8N9I5 356 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 GATSQ8NAP1 163 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF418Q8TF45 676 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 SLC25A38Q96DW6 304 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 FAHD2AQ96GK7 314 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 VPS39Q96JC1 886 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 SERPINB12Q96P63 405 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 DHRS9Q9BPW9 319 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 ANP32EQ9BTT0 268 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 TBCDQ9BTW9 1192 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF717Q9BY31 904 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 NAT10Q9H0A0 1025 aaKnown RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 STMN4Q9H169 189 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 CAB39LQ9H9S4 337 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 FAIMQ9NVQ4 179 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.07□□□□□ -1.92
ATXN3-217ENST00000553287 TAS2R13Q9NYV9 303 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 MAT2BQ9NZL9 334 aa3.07□□□□□ -1.92
ATXN3-217ENST00000553287 TENM3Q9P273 2699 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 A0A0A6YYD5 115 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 ATP6V1G2-DDX39BF2Z307 99 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 G3V4G9 280 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 PANO1I0J062 215 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 SLC28A1O00337 649 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 CFLARO15519 480 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 EFNA2O43921 213 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 SYNGR4O95473 234 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 STAMBPO95630 424 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 ECDO95905 644 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-217ENST00000553287 KLK1P06870 262 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 GSTA1P08263 222 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 IL12BP29460 328 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 AP1S2P56377 157 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 NME5P56597 212 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 GNB2P62879 340 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 UBA52P62987 128 aaKnown RBP3.06□□□□□ -1.92
ATXN3-217ENST00000553287 IRF8Q02556 426 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 TGM3Q08188 693 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 GANABQ14697 944 aaKnown RBP3.06□□□□□ -1.92
ATXN3-217ENST00000553287 SLMAPQ14BN4 828 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 ZSWIM7Q19AV6 140 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 AARDQ4LEZ3 155 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 ARFGEF3Q5TH69 2177 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 HBMQ6B0K9 141 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 HIST2H2AA3Q6FI13 130 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 LEG1Q6P5S2 330 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 SCIMPQ6UWF3 145 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 FRA10AC1Q70Z53 315 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-217ENST00000553287 SIGLECL1Q8N7X8 197 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 OR2V1Q8NHB1 315 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 FNDC8Q8TC99 324 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 OSTF1Q92882 214 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 HIST1H2ACQ93077 130 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 LHX4Q969G2 390 aa3.06□□□□□ -1.92
ATXN3-217ENST00000553287 SH3YL1Q96HL8 342 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms