RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 PTGR2Q8N8N7 351 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 RBM15BQ8NDT2 890 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR8G5Q8NG78 346 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR2Z1Q8NG97 314 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR4K5Q8NGD3 323 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR5D13Q8NGL4 314 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR5M8Q8NGP6 311 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR13G1Q8NGZ3 307 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF563Q8TA94 476 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FBXO25Q8TCJ0 367 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 C17orf50Q8WW18 174 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 EXT2Q93063 718 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ATP6V1E2Q96A05 226 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM106AQ96A25 262 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 NABP1Q96AH0 204 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CIDECQ96AQ7 238 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 C12orf43Q96C57 262 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PPCDCQ96CD2 204 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CCDC126Q96EE4 140 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OTUB1Q96FW1 271 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 COG8Q96MW5 612 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF583Q96ND8 569 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 TECTBQ96PL2 329 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR7D2Q96RA2 312 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PRPF18Q99633 342 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 NABP2Q9BQ15 211 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MRPL13Q9BYD1 178 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 DNTTIP1Q9H147 329 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 SLC38A1Q9H2H9 487 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 SIAEQ9HAT2 523 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ELOVL3Q9HB03 270 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 SIRT7Q9NRC8 400 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ADPRHL2Q9NX46 363 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MRPL39Q9NYK5 338 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 EIF3KQ9UBQ5 218 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ATP6V1HQ9UI12 483 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MKLN1Q9UL63 735 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FAF1Q9UNN5 650 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CHMP2BQ9UQN3 213 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 POFUT2Q9Y2G5 429 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 WDR45Q9Y484 360 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 UGT2A1Q9Y4X1 527 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 DNAH7Q8WXX0 4024 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 NUP214P35658 2090 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 IGKV1D-42A0A075B6H8 117 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TRAV38-1A0A0B4J264 116 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 C5orf49A4QMS7 147 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 OOEPA6NGQ2 149 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CLDN24A6NM45 220 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 A8MT66 165 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ODF3BA8MYP8 253 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SEC14L6B5MCN3 397 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CCL24O00175 119 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ADAM20O43506 726 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TIMM8AO60220 97 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PEX14O75381 377 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 DEDDO75618 318 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 IPO7O95373 1038 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 MT-ATP6P00846 226 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RBP4P02753 201 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SERPINE1P05121 402 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GSTA2P09210 222 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RBP1P09455 135 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 IGHV4-30-4P0DP06 118 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 HLA-DOBP13765 273 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 MUC1P15941 1255 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SDC1P18827 310 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 NCF2P19878 526 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GRPRP30550 384 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CDX1P47902 265 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CSNK1A1P48729 337 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TGM4P49221 684 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GDI2P50395 445 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ARHGDIAP52565 204 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CDH12P55289 794 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 CAV3P56539 151 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 ARL4CP56559 192 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TPM4P67936 248 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PSG4Q00888 419 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 RUNX1Q01196 453 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 BTKQ06187 659 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 PUDPQ08623 228 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 C2orf54Q08AI8 447 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 KLRD1Q13241 179 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 C1DQ13901 141 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 KIR2DS1Q14954 304 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 FASTKD3Q14CZ7 662 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GPR68Q15743 365 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 UAP1Q16222 522 aaPredicted RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 LY6EQ16553 131 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 HAGHQ16775 308 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SMU1Q2TAY7 513 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM95Q3KNT9 176 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 GALNTL6Q49A17 601 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SGO1Q5FBB7 561 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 FAM201AQ5SY85 155 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 SPATA46Q5T0L3 261 aa1.74□□□□□ -2.13
PTCH1-223ENST00000551623 MRPL2Q5T653 305 aaKnown RBP1.74□□□□□ -2.13
PTCH1-223ENST00000551623 INTS11Q5TA45 600 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms