RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 RAP1BP61224 184 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 ESRRGP62508 458 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 RAP1AP62834 184 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 CSNK2BP67870 215 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 ST3GAL3Q11203 375 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 COX10Q12887 443 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 FGD3Q5JSP0 725 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 ZNF691Q5VV52 312 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 OR2T2Q6IF00 324 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 OR5AS1Q8N127 324 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 PNLDC1Q8NA58 520 aaKnown RBP11.18□□□□□ -0.62
CDX2-202ENST00000548877 OR5L1Q8NGL2 311 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 ZNF582Q96NG8 517 aaPredicted RBP11.18□□□□□ -0.62
CDX2-202ENST00000548877 FEVQ99581 238 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 KRCC1Q9NPI7 259 aaPredicted RBP11.18□□□□□ -0.62
CDX2-202ENST00000548877 GMPPBQ9Y5P6 360 aa11.18□□□□□ -0.62
CDX2-202ENST00000548877 F5H5P2 479 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 GPR37O15354 613 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 AHCYL1O43865 530 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 CCDC159P0C7I6 412 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 TGFBR2P37173 567 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 YAP1P46937 504 aaKnown RBP11.17□□□□□ -0.62
CDX2-202ENST00000548877 LOXL3P58215 753 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 TAS2R41P59536 307 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 GABARAPL2P60520 117 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 CXCR4P61073 352 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 PPP1R8Q12972 351 aaKnown RBP11.17□□□□□ -0.62
CDX2-202ENST00000548877 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 AQP6Q13520 282 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 APOFQ13790 326 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 TRAM2Q15035 370 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 FAM189A2Q15884 450 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 ANKDD1AQ495B1 522 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 METTL11BQ5VVY1 283 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 PITX2Q99697 317 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 DGCR6LQ9BY27 220 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 EMC7Q9NPA0 242 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 ERVK-18Q9QC07 812 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 CTSZQ9UBR2 303 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 FBLN5Q9UBX5 448 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 MED31Q9Y3C7 131 aa11.17□□□□□ -0.62
CDX2-202ENST00000548877 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 DPPA5A6NC42 116 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 J3KTA2 159 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 PIP5K1CO60331 668 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 MPZL2O60487 215 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 MRPS14O60783 128 aaKnown RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 PTBP3O95758 552 aaKnown RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 SMIM18P0DKX4 95 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 IRF2P14316 349 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 CD200P41217 278 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 CTXN1P60606 82 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 FHL1Q13642 323 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 KCNJ8Q15842 424 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 CCDC92Q53HC0 331 aaPredicted RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 DHRS7BQ6IAN0 325 aaPredicted RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 METAP1DQ6UB28 335 aaPredicted RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 CD300LDQ6UXZ3 194 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 RRM2BQ7LG56 351 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 AQP11Q8NBQ7 271 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 OR1F12Q8NHA8 337 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 SLC7A6Q92536 515 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 LHX4Q969G2 390 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
CDX2-202ENST00000548877 HRASLS5Q96KN8 279 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 DMRTB1Q96MA1 342 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 TMEM100Q9NV29 134 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 SCN3BQ9NY72 215 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 PTTG3PQ9NZH4 202 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 VPREB3Q9UKI3 123 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 A4GNTQ9UNA3 340 aa11.16□□□□□ -0.62
CDX2-202ENST00000548877 COL7A1Q02388 2944 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 FFAR1O14842 300 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 NDUFA2O43678 99 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 OR10H3O60404 316 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.62
CDX2-202ENST00000548877 CDC42P60953 191 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 IL5RAQ01344 420 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 EGR3Q06889 387 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 PIN1Q13526 163 aaPredicted RBP11.15□□□□□ -0.62
CDX2-202ENST00000548877 C6orf141Q5SZD1 244 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 COLCA1Q6ZS62 124 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 OR11L1Q8NGX0 322 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 FBLIM1Q8WUP2 373 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 CFHR4Q92496 578 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 TECTBQ96PL2 329 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDX2-202ENST00000548877 ZNRD1Q9P1U0 126 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 TPRKBQ9Y3C4 175 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 KPTNQ9Y664 436 aa11.15□□□□□ -0.62
CDX2-202ENST00000548877 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 TRBV4-1A0A0J9YWV2 114 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms