RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SLC22A4Q9H015 551 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 ADGRL4Q9HBW9 690 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 RHBDD3Q9Y3P4 386 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 ORC6Q9Y5N6 252 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
DDX54-205ENST00000548786 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.24□□□□□ -0.29
DDX54-205ENST00000548786 hCG_1807616A0A1W2PRN6 198 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 SLC22A31A6NKX4 558 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 CEACAM18A8MTB9 384 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
DDX54-205ENST00000548786 GMDSO60547 372 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 PNPP00491 289 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 ALPLP05186 524 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 PCMT1P22061 227 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 CD80P33681 288 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 CXCR4P61073 352 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 MFGE8Q08431 387 aaPredicted RBP13.24□□□□□ -0.29
DDX54-205ENST00000548786 DCAF12L2Q5VW00 463 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 RHOUQ7L0Q8 258 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 GID4Q8IVV7 300 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 UBE2FQ969M7 185 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 OR8B4Q96RC9 309 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 MROQ9BYG7 248 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 FN3KRPQ9HA64 309 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 PATZ1Q9HBE1 687 aaKnown RBP13.24□□□□□ -0.29
DDX54-205ENST00000548786 S100A14Q9HCY8 104 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 G6PC2Q9NQR9 355 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 C1orf123Q9NWV4 160 aa13.24□□□□□ -0.29
DDX54-205ENST00000548786 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.24□□□□□ -0.29
DDX54-205ENST00000548786 NOP16Q9Y3C1 178 aaKnown RBP13.24□□□□□ -0.29
DDX54-205ENST00000548786 PPIAL4EA0A075B759 164 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 LOC105371242A0A075B767 164 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 A0A0G2JMP0 313 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 A0A0X1KG70 313 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 TMEM269A0A1B0GVZ9 245 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 PPIAL4DF5H284 164 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 IFNL4K9M1U5 179 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 RGS9O75916 674 aaPredicted RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 BAG2O95816 211 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 AVPP01185 164 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 PPIAL4FP0DN26 164 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 RPS2P15880 293 aaKnown RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 ADRA2CP18825 462 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 CFL1P23528 166 aaKnown RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 ACKR3P25106 362 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 GNALP38405 381 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 GATA4P43694 442 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 CDC42P60953 191 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 TMEM155Q4W5P6 130 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 ZNF322Q6U7Q0 402 aaPredicted RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 WDR86Q86TI4 376 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 C1orf87Q8N0U7 546 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 MUC20Q8N307 709 aaPredicted RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 CELF2-AS1Q8N7Q2 184 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 OR4M2Q8NGB6 313 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 ASB17Q8WXJ9 295 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 FAM71F1Q96KD3 344 aaPredicted RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 TMEM246Q9BRR3 403 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 METTL17Q9H7H0 456 aaPredicted RBP13.23□□□□□ -0.29
DDX54-205ENST00000548786 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 TMEM165Q9HC07 324 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 IMPAD1Q9NX62 359 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 PPIAL4AQ9Y536 164 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 TMEM14AQ9Y6G1 99 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 COL6A5A8TX70 2615 aa13.23□□□□□ -0.29
DDX54-205ENST00000548786 ZNF850A8MQ14 1090 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 ZNF670-ZNF695F2Z2N8 137 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 DDOSTP39656 456 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 ALDH3A2P51648 485 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 RIDAP52758 137 aaKnown RBP13.22□□□□□ -0.29
DDX54-205ENST00000548786 CSNK2BP67870 215 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 OR8B8Q15620 311 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 DMRTC1Q5HYR2 192 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 C1orf229Q6ZS94 237 aaPredicted RBP13.22□□□□□ -0.29
DDX54-205ENST00000548786 SSX6Q7RTT6 188 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 ZNF679Q8IYX0 411 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 OR10H4Q8NGA5 316 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 OR51E1Q8TCB6 317 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 Q8TCH9 128 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 EME1Q96AY2 570 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 MBOAT4Q96T53 435 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 PBOV1Q9GZY1 135 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 RGCCQ9H4X1 137 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 MMP26Q9NRE1 261 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 C14orf119Q9NWQ9 140 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 CLN6Q9NWW5 311 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 USE1Q9NZ43 259 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 RNF7Q9UBF6 113 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
DDX54-205ENST00000548786 IGHV3OR15-7A0A075B7D8 119 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 H3BSH0 61 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 FOXH1O75593 365 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 RPP14O95059 124 aaKnown RBP13.21□□□□□ -0.29
DDX54-205ENST00000548786 HTR1FP30939 366 aa13.21□□□□□ -0.29
DDX54-205ENST00000548786 ATP6V1E1P36543 226 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms