RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 DECR2Q9NUI1 292 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 PTTG3PQ9NZH4 202 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 PCDHGB5Q9Y5G0 923 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
PTCH1-217ENST00000548420 STAB2Q8WWQ8 2551 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 LCE6AA0A183 80 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 ZAR1LA6NP61 321 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 H3BNX3 289 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 MITFO75030 526 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-217ENST00000548420 CRYBA1P05813 215 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 SPARCP09486 303 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 EPHA2P29317 976 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 GK2Q14410 553 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-217ENST00000548420 USP51Q70EK9 711 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-217ENST00000548420 SHFQ7M4L6 423 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 OR8G5Q8NG78 346 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 RNF133Q8WVZ7 376 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 SPTSSAQ969W0 71 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 PHF21AQ96BD5 680 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 ELMOD3Q96FG2 381 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 KCNJ15Q99712 375 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 SLC30A2Q9BRI3 323 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 ABHD6Q9BV23 337 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 TEX12Q9BXU0 123 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 EGLN1Q9GZT9 426 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 OR51V1Q9H2C8 321 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 KIF17Q9P2E2 1029 aa11.66□□□□□ -0.54
PTCH1-217ENST00000548420 DNAH7Q8WXX0 4024 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 ZNF878C9JN71 531 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 CDC14BO60729 498 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 LCATP04180 440 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 ANOS1P23352 680 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 KPNB1Q14974 876 aaKnown RBP11.65□□□□□ -0.54
PTCH1-217ENST00000548420 SNAPC1Q16533 368 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 SNAI3Q3KNW1 292 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 SLX4IPQ5VYV7 408 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 C12orf73Q69YU5 71 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 OR2T2Q6IF00 324 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 C9orf139Q6ZV77 190 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 PRSS45Q7RTY3 260 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
PTCH1-217ENST00000548420 BBS1Q8NFJ9 593 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 OR13G1Q8NGZ3 307 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 OTOSQ8NHW6 89 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 PYDC1Q8WXC3 89 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 RBMXL1Q96E39 390 aaKnown RBP11.65□□□□□ -0.54
PTCH1-217ENST00000548420 AMELYQ99218 206 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 TEAD3Q99594 435 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 OSBPL10Q9BXB5 764 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 TOR3AQ9H497 397 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 KRT84Q9NSB2 600 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 TVP23BQ9NYZ1 205 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 IL19Q9UHD0 177 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 OAZ3Q9UMX2 235 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 AUP1Q9Y679 476 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 CACNG2Q9Y698 323 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
PTCH1-217ENST00000548420 SRRM5B3KS81 715 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 PRKYO43930 277 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 OPRL1P41146 370 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 SLC15A1P46059 708 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 MTNR1AP48039 350 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 GRB2P62993 217 aaKnown RBP11.64□□□□□ -0.55
PTCH1-217ENST00000548420 TNFAIP6P98066 277 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF154Q13106 437 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 EIF2B1Q14232 305 aaKnown RBP11.64□□□□□ -0.55
PTCH1-217ENST00000548420 HFEQ30201 348 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 FOXB2Q5VYV0 432 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 ZFP1Q6P2D0 407 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF454Q8N9F8 522 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 OR2Z1Q8NG97 314 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 OR6N2Q8NGY6 317 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 SPSB4Q96A44 273 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 OTULINQ96BN8 352 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 PLEKHA8Q96JA3 519 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF582Q96NG8 517 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-217ENST00000548420 COPS4Q9BT78 406 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 SEMA6AQ9H2E6 1030 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 PRDM13Q9H4Q3 707 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 CENPMQ9NSP4 180 aa11.64□□□□□ -0.55
PTCH1-217ENST00000548420 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 PPIAL4EA0A075B759 164 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 CCDC182A6NF36 153 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 PPIAL4DF5H284 164 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 MLNRO43193 412 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 TPD52L2O43399 206 aaKnown RBP11.63□□□□□ -0.55
PTCH1-217ENST00000548420 SELENOFO60613 162 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 PPIAL4FP0DN26 164 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 ALOX5APP20292 161 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 TNFSF4P23510 183 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 PRKXP51817 358 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 ZNF92Q03936 586 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 MALLQ13021 153 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 APOFQ13790 326 aa11.63□□□□□ -0.55
PTCH1-217ENST00000548420 DEFB112Q30KQ8 113 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms