RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 DPY19L4Q7Z388 723 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 VTCN1Q7Z7D3 282 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 CPLX4Q7Z7G2 160 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 LNX2Q8N448 690 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 SLC7A13Q8TCU3 470 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 R3HDM4Q96D70 268 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 DCTN5Q9BTE1 182 aa13.84□□□□□ -0.19
VPS29-204ENST00000548259 A0A1W2PQ09 198 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 UNC119BA6NIH7 251 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 DCTN6O00399 190 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 NOS3P29474 1203 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 KLRD1Q13241 179 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 AANATQ16613 207 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 LRRC75BQ2VPJ9 315 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 FGD3Q5JSP0 725 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 OR6V1Q8N148 313 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 OR56B2PQ8NGI1 322 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 OR5D13Q8NGL4 314 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 OR9Q1Q8NGQ5 310 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 OR2AE1Q8NHA4 323 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 C8orf46Q8TAG6 207 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 PHF21AQ96BD5 680 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 MED30Q96HR3 178 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 DNTTIP1Q9H147 329 aa13.83□□□□□ -0.2
VPS29-204ENST00000548259 A0A0G2JND7 137 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 A0A1W2PRQ8 180 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 GSTA4O15217 222 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 XRCC2O43543 280 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 PEX14O75381 377 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 FCN3O75636 299 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 H1F0P07305 194 aaKnown RBP13.82□□□□□ -0.2
VPS29-204ENST00000548259 POU1F1P28069 291 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 SLC6A6P31641 620 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 DGCR6Q14129 220 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 TAF13Q15543 124 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 LY6EQ16553 131 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 SNAI3Q3KNW1 292 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 NDUFA11Q86Y39 141 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 FAM216BQ8N7L0 139 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 Q8N7P7 452 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 PPP1R35Q8TAP8 253 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 NMNAT3Q96T66 252 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 PNRC2Q9NPJ4 139 aaKnown RBP13.82□□□□□ -0.2
VPS29-204ENST00000548259 RPRD1BQ9NQG5 326 aaKnown RBP13.82□□□□□ -0.2
VPS29-204ENST00000548259 PLXNB1O43157 2135 aa13.82□□□□□ -0.2
VPS29-204ENST00000548259 ACOT8O14734 319 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 FAHP16930 419 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
VPS29-204ENST00000548259 SNCBQ16143 134 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 GLYATL3Q5SZD4 288 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 ZBTB46Q86UZ6 589 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 FTMTQ8N4E7 242 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 COPS4Q9BT78 406 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 INTS9Q9NV88 658 aaKnown RBP13.81□□□□□ -0.2
VPS29-204ENST00000548259 ENPP4Q9Y6X5 453 aa13.81□□□□□ -0.2
VPS29-204ENST00000548259 KMT2CQ8NEZ4 4911 aaKnown RBP13.81□□□□□ -0.2
VPS29-204ENST00000548259 H0YAE9 185 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 ARPC3O15145 178 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 GLCEO94923 617 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 MPIG6BO95866 241 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 CD33P20138 364 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 GNALP38405 381 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 TGM4P49221 684 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 ATPAF1Q5TC12 328 aaPredicted RBP13.8□□□□□ -0.2
VPS29-204ENST00000548259 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 FGFRL1Q8N441 504 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 PNKDQ8N490 385 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 CYB561A3Q8NBI2 242 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 OR1M1Q8NGA1 313 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 OR4K13Q8NH42 304 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 FANK1Q8TC84 345 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 ITPKCQ96DU7 683 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 HSH2DQ96JZ2 352 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 NKX3-1Q99801 234 aaPredicted RBP13.8□□□□□ -0.2
VPS29-204ENST00000548259 MEGF9Q9H1U4 602 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 SP140LQ9H930 580 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 HAO2Q9NYQ3 351 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 SLC25A10Q9UBX3 287 aaPredicted RBP13.8□□□□□ -0.2
VPS29-204ENST00000548259 CAPN7Q9Y6W3 813 aa13.8□□□□□ -0.2
VPS29-204ENST00000548259 TENM3Q9P273 2699 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 A0A1B0GW55 424 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 CXCR6O00574 342 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 IDH3BO43837 385 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 NDUFB7P17568 137 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 CFL1P23528 166 aaKnown RBP13.79□□□□□ -0.2
VPS29-204ENST00000548259 OTX1P32242 354 aaPredicted RBP13.79□□□□□ -0.2
VPS29-204ENST00000548259 OMPP47874 163 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 KRT72Q14CN4 511 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 FOXB2Q5VYV0 432 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 STUMQ69YW2 141 aa13.79□□□□□ -0.2
VPS29-204ENST00000548259 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms