RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PHYHO14832 338 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 ZNF254O75437 659 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 PPIAL4FP0DN26 164 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 DCTDP32321 178 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 ROM1Q03395 351 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 OR8B8Q15620 311 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 GFOD2Q3B7J2 385 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 PRAMEF6Q5VXH4 476 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 ITFG2Q969R8 447 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 RAB3IPQ96QF0 476 aaPredicted RBP13.35□□□□□ -0.27
DDX54-204ENST00000546898 PKP2Q99959 881 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 RIBC2Q9H4K1 309 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 BRD7Q9NPI1 651 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 C14orf119Q9NWQ9 140 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 HAO2Q9NYQ3 351 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 USE1Q9NZ43 259 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 ZNF319Q9P2F9 582 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 ORC6Q9Y5N6 252 aa13.35□□□□□ -0.27
DDX54-204ENST00000546898 IGHV3-64DA0A0J9YX35 117 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 CEACAM18A8MTB9 384 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 FAM20BO75063 409 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 PMELP40967 661 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 GSK3AP49840 483 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 SCGB2A2Q13296 93 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 ZNF404Q494X3 552 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 DCAF12L2Q5VW00 463 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 FAHD2BQ6P2I3 314 aaPredicted RBP13.34□□□□□ -0.27
DDX54-204ENST00000546898 ZNF771Q7L3S4 317 aaPredicted RBP13.34□□□□□ -0.27
DDX54-204ENST00000546898 BCDIN3DQ7Z5W3 292 aaKnown RBP13.34□□□□□ -0.27
DDX54-204ENST00000546898 ZNF679Q8IYX0 411 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 OR8J1Q8NGP2 316 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 FAHD2AQ96GK7 314 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 OR8B4Q96RC9 309 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 IL4I1Q96RQ9 567 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 ADGRL4Q9HBW9 690 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 TMEM165Q9HC07 324 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 COPS3Q9UNS2 423 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 LRCH1Q9Y2L9 728 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 POLR3KQ9Y2Y1 108 aaPredicted RBP13.34□□□□□ -0.27
DDX54-204ENST00000546898 PPIAL4AQ9Y536 164 aa13.34□□□□□ -0.27
DDX54-204ENST00000546898 ALPLP05186 524 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 RPS2P15880 293 aaKnown RBP13.33□□□□□ -0.28
DDX54-204ENST00000546898 RBMXP38159 391 aaKnown RBP13.33□□□□□ -0.28
DDX54-204ENST00000546898 GNALP38405 381 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.28
DDX54-204ENST00000546898 HCCSP53701 268 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 CDC42P60953 191 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 LCN2P80188 198 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 POU4F2Q12837 409 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 MPPED2Q15777 294 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
DDX54-204ENST00000546898 ESCO2Q56NI9 601 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 SLC35F2Q8IXU6 374 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 OR8B12Q8NGG6 310 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 OR8S1Q8NH09 359 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 DVL3Q92997 716 aaPredicted RBP13.33□□□□□ -0.28
DDX54-204ENST00000546898 ABCB9Q9NP78 766 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 UFSP2Q9NUQ7 469 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 CLN6Q9NWW5 311 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 FAM206AQ9NX38 181 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 RNF7Q9UBF6 113 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 MIOXQ9UGB7 285 aa13.33□□□□□ -0.28
DDX54-204ENST00000546898 WARS2Q9UGM6 360 aaKnown RBP13.33□□□□□ -0.28
DDX54-204ENST00000546898 A0A0U1RQV5 110 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 ZNF670-ZNF695F2Z2N8 137 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 EI24O14681 340 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 POLR2IP36954 125 aaKnown RBP13.32□□□□□ -0.28
DDX54-204ENST00000546898 ALDH3A2P51648 485 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 TMED1Q13445 227 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 ZNF322Q6U7Q0 402 aaPredicted RBP13.32□□□□□ -0.28
DDX54-204ENST00000546898 DCDC5Q6ZRR9 648 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 TMEM246Q9BRR3 403 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 TMPRSS13Q9BYE2 586 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 MOB1AQ9H8S9 216 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 MPC1Q9Y5U8 109 aa13.32□□□□□ -0.28
DDX54-204ENST00000546898 TMEM269A0A1B0GVZ9 245 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 ANXA2P2A6NMY6 339 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 PRR32B1ATL7 298 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 ZNF205O95201 554 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 WNT2P09544 360 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 ATP6V1B1P15313 513 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 ZFP36P26651 326 aaKnown RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 HTR1FP30939 366 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 CXCR4P61073 352 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 SEC61A1P61619 476 aaKnown RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 IL5RAQ01344 420 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 EGR3Q06889 387 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 NLRC3Q7RTR2 1065 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 C1QL2Q7Z5L3 287 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 RFLNBQ8N5W9 214 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 OR8B3Q8NGG8 313 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 OR51G2Q8NGK0 314 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 RFKQ969G6 155 aa13.31□□□□□ -0.28
DDX54-204ENST00000546898 NEIL1Q96FI4 390 aaPredicted RBP13.31□□□□□ -0.28
DDX54-204ENST00000546898 OR8B2Q96RD0 313 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms