RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
DDX54-203ENST00000546869 MRPL28Q13084 256 aaKnown RBP12.27□□□□□ -0.45
DDX54-203ENST00000546869 ZBTB37Q5TC79 503 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 CATSPERDQ86XM0 798 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 FTMTQ8N4E7 242 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 BHLHE23Q8NDY6 225 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 CCDC54Q8NEL0 328 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 OR56B2PQ8NGI1 322 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 OR52I1Q8NGK6 324 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 RORBQ92753 470 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 YIPF5Q969M3 257 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 ERGIC1Q969X5 290 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 LYZL4Q96KX0 146 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 TTTY10Q9BZA0 68 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 ERVK13-1Q9NX77 482 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 OR52A1Q9UKL2 312 aa12.27□□□□□ -0.45
DDX54-203ENST00000546869 HIVEP1P15822 2718 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 DHRS7CA6NNS2 312 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 ANKRD30BLA7E2S9 258 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 H7C1Q1 480 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 TPD52L2O43399 206 aaKnown RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 MTRF1O75570 445 aaKnown RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 CST4P01036 141 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 TTRP02766 147 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 PIPP12273 146 aaPredicted RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 CCR9P51686 369 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 SLC3A1Q07837 685 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 MFGE8Q08431 387 aaPredicted RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 MZT1Q08AG7 82 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 ZNF181Q2M3W8 571 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 HFEQ30201 348 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 LAIR2Q6ISS4 152 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 FAM220AQ7Z4H9 259 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 OR2V2Q96R30 315 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 ANKRD60Q9BZ19 345 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 ABCB9Q9NP78 766 aa12.26□□□□□ -0.45
DDX54-203ENST00000546869 ZNF275Q9NSD4 429 aaPredicted RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 CNOT2Q9NZN8 540 aaKnown RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 DIMT1Q9UNQ2 313 aaKnown RBP12.26□□□□□ -0.45
DDX54-203ENST00000546869 RNF223E7ERA6 249 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 LYNX1G3V0Z9 82 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 H0YL77 283 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 RPP14O95059 124 aaKnown RBP12.25□□□□□ -0.45
DDX54-203ENST00000546869 FSTL3O95633 263 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 RPSAP08865 295 aaKnown RBP12.25□□□□□ -0.45
DDX54-203ENST00000546869 INHBBP09529 407 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 LIMS3P0CW19 117 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 LIMS4P0CW20 117 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 LYNX1P0DP58 116 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 CCL1P22362 96 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 CA6P23280 308 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 MYF6P23409 242 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 VHLP40337 213 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 MAP2K3P46734 347 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 PRSS12P56730 875 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 OR12D2P58182 307 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 MAB21L1Q13394 359 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 TP53I3Q53FA7 332 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 C6orf52Q5T4I8 152 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 BCL2L15Q5TBC7 163 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 LHFPL3Q86UP9 236 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 CIARTQ8N365 385 aaPredicted RBP12.25□□□□□ -0.45
DDX54-203ENST00000546869 OR51E1Q8TCB6 317 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 GGHQ92820 318 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 PPP1R14AQ96A00 147 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 MEGF10Q96KG7 1140 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 ALG8Q9BVK2 526 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 GNG8Q9UK08 70 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
DDX54-203ENST00000546869 A0A1B0GTI1 187 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 EFCAB10A6NFE3 127 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 DHRS3O75911 302 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 HLA-DPB1P04440 258 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 USF1P22415 310 aaPredicted RBP12.24□□□□□ -0.45
DDX54-203ENST00000546869 ACKR3P25106 362 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 RIPPLY1Q0D2K3 151 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 OR8G1Q15617 311 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 GFOD2Q3B7J2 385 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 SPRNQ5BIV9 151 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 IZUMO2Q6UXV1 221 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 DOK3Q7L591 496 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 BIVMQ86UB2 503 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 SEMA6DQ8NFY4 1073 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 OR10AD1Q8NGE0 317 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 Q8TCH9 128 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 ITLN1Q8WWA0 313 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 PELI1Q96FA3 418 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 TMEM80Q96HE8 168 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 GCM1Q9NP62 436 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 GPR84Q9NQS5 396 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 ACOXLQ9NUZ1 547 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 FKBP14Q9NWM8 211 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 C14orf119Q9NWQ9 140 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 PSORS1C1Q9UIG5 152 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 RAB26Q9ULW5 256 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 PPP1R3CQ9UQK1 317 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 SLC22A13Q9Y226 551 aa12.24□□□□□ -0.45
DDX54-203ENST00000546869 CAB39Q9Y376 341 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms