RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KNG1P01042 644 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 NGFP01138 241 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 LCATP04180 440 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 SOD3P08294 240 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 CCDC159P0C7I6 412 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 DANCRP0C864 163 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 LIMS3P0CW19 117 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 LIMS4P0CW20 117 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 ANOS1P23352 680 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 DCKP27707 260 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 TTKP33981 857 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 FABP6P51161 128 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 KLF3P57682 345 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 SNRPD2P62316 118 aaKnown RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF85Q03923 595 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 MFGE8Q08431 387 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 EFNB3Q15768 340 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 SNAI3Q3KNW1 292 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 CDONQ4KMG0 1287 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 TP53I3Q53FA7 332 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 C6orf141Q5SZD1 244 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 BCL2L15Q5TBC7 163 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 COLCA1Q6ZS62 124 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 FAM57BQ71RH2 274 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 DTX2Q86UW9 622 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 C1orf174Q8IYL3 243 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 FBXL14Q8N1E6 418 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 MUC15Q8N387 334 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF786Q8N393 782 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 YIPF7Q8N8F6 280 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 OR52H1Q8NGJ2 320 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 OR5L1Q8NGL2 311 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 SLC25A40Q8TBP6 338 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 NRGNQ92686 78 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 MRPL24Q96A35 216 aaKnown RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 C4orf36Q96KX1 117 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 COG8Q96MW5 612 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 CCL19Q99731 98 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 MRPL37Q9BZE1 423 aaKnown RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 OR2J1Q9GZK6 312 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 POFUT1Q9H488 388 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 PLK3Q9H4B4 646 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 OPA3Q9H6K4 179 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 FGF20Q9NP95 211 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 PLCXD1Q9NUJ7 323 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 FKBP14Q9NWM8 211 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 PAK1IP1Q9NWT1 392 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 FAM206AQ9NX38 181 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 PTTG3PQ9NZH4 202 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 PSORS1C1Q9UIG5 152 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 GNG8Q9UK08 70 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 BLOC1S6Q9UL45 172 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 GTF2A1LQ9UNN4 478 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 DIMT1Q9UNQ2 313 aaKnown RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 EXOSC1Q9Y3B2 195 aaKnown RBP5.42□□□□□ -1.54
PRKDC-211ENST00000546304 CMAHPQ9Y471 501 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 PCDHGB5Q9Y5G0 923 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 R4GMQ9 66 aa5.42□□□□□ -1.54
PRKDC-211ENST00000546304 TLN2Q9Y4G6 2542 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 IGLV3-9A0A075B6K5 115 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TMEM269A0A1B0GVZ9 245 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 C5orf63A6NC05 138 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 METTL15A6NJ78 407 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF561-AS1K7EIQ3 104 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 M0R233 179 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MYL12BO14950 172 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 XRCC2O43543 280 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SRSF10O75494 262 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 RPP14O95059 124 aaKnown RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 RAF1P04049 648 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 AMY2AP04746 511 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ADRA2AP08913 450 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF250P15622 560 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 CD53P19397 219 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 AMY2BP19961 511 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TUBG1P23258 451 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 CRHBPP24387 322 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GCH1P30793 250 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 APOBEC3AP31941 199 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 DCTDP32321 178 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SERPINF1P36955 418 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GNALP38405 381 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MPV17P39210 176 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ETV1P50549 477 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 CSNK2BP67870 215 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 SLC35A2P78381 396 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ST3GAL4Q11206 333 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MALLQ13021 153 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 MED21Q13503 144 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GALEQ14376 348 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GK2Q14410 553 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 HLXQ14774 488 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TIGD6Q17RP2 521 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GFOD2Q3B7J2 385 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF718Q3SXZ3 478 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 TMEM255AQ5JRV8 349 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 GLYATL3Q5SZD4 288 aa5.41□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF684Q5T5D7 378 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms