RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ABHD6Q9BV23 337 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 OR10A2Q9H208 303 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 OR51V1Q9H2C8 321 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 MARCH7Q9H992 704 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 RNPEPL1Q9HAU8 725 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 ESM1Q9NQ30 184 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 C1orf123Q9NWV4 160 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 PDP1Q9P0J1 537 aaPredicted RBP7.81□□□□□ -1.16
YBX3-218ENST00000546298 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
YBX3-218ENST00000546298 OOEPA6NGQ2 149 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 FAM183AA6NL82 134 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 ANXA2P2A6NMY6 339 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 P2RY10O00398 339 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 GYG2O15488 501 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 ADAM20O43506 726 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 TIPRLO75663 272 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 ECDO95905 644 aaPredicted RBP7.8□□□□□ -1.16
YBX3-218ENST00000546298 PLATP00750 562 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 HKR1P10072 659 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 OSMP13725 252 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 NAA10P41227 235 aaPredicted RBP7.8□□□□□ -1.16
YBX3-218ENST00000546298 GINS1Q14691 196 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 AWAT1Q58HT5 328 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 GPR157Q5UAW9 335 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 SFRP4Q6FHJ7 346 aaPredicted RBP7.8□□□□□ -1.16
YBX3-218ENST00000546298 ZNF841Q6ZN19 808 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 FAM57BQ71RH2 274 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 SLC16A9Q7RTY1 509 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 BCL6BQ8N143 479 aaPredicted RBP7.8□□□□□ -1.16
YBX3-218ENST00000546298 IQCF1Q8N6M8 205 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 PNLDC1Q8NA58 520 aaKnown RBP7.8□□□□□ -1.16
YBX3-218ENST00000546298 THEM6Q8WUY1 208 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 CANT1Q8WVQ1 401 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 ITFG2Q969R8 447 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 ZDHHC16Q969W1 377 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 DACT3Q96B18 629 aaPredicted RBP7.8□□□□□ -1.16
YBX3-218ENST00000546298 SGK3Q96BR1 496 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 REEP6Q96HR9 211 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 PGAM5Q96HS1 289 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 CLPTM1LQ96KA5 538 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 TECTBQ96PL2 329 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 NIPAL2Q9H841 368 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 ABCB9Q9NP78 766 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 MXRA5Q9NR99 2828 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
YBX3-218ENST00000546298 IGHV3OR16-10A0A075B7F0 116 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 TRAV40A0A0B4J280 105 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 C5orf63A6NC05 138 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 DNAJC9-AS1A6NH13 148 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 ZNF879B4DU55 563 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 C22orf46C9J442 243 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 C3orf80F5H4A9 247 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 DYNC1I1O14576 645 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 TNFRSF13BO14836 293 aaPredicted RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 PRODHO43272 600 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 LYNP07948 512 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 IGHV4-38-2P0DP08 117 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 PSKH1P11801 424 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 MUC1P15941 1255 aaPredicted RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 OPRL1P41146 370 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 GSK3AP49840 483 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 ZNF121P58317 390 aaPredicted RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 FGF12P61328 243 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 RPS7P62081 194 aaKnown RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 FAM3AP98173 230 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 IL5RAQ01344 420 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 FLOT2Q14254 428 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 MICBQ29980 383 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 KLHL12Q53G59 568 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 SLC35D3Q5M8T2 416 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 TEX36Q5VZQ5 186 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 PLBD1Q6P4A8 553 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 ZNF826PQ6ZT77 177 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 TRPM8Q7Z2W7 1104 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 SPATA24Q86W54 205 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 GCSAMQ8N6F7 178 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 C19orf18Q8NEA5 215 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 OR1M1Q8NGA1 313 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 OTOSQ8NHW6 89 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 DNAJC9Q8WXX5 260 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 MICU1Q9BPX6 476 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 ZNF747Q9BV97 191 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 PAPOLGQ9BWT3 736 aaKnown RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 MED20Q9H944 212 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 NOX4Q9NPH5 578 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 DNAJC27Q9NZQ0 273 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 KAAG1Q9UBP8 84 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 DNAJB9Q9UBS3 223 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 ZNF391Q9UJN7 358 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 MPC1Q9Y5U8 109 aa7.79□□□□□ -1.16
YBX3-218ENST00000546298 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
YBX3-218ENST00000546298 hCG_38984A0A1B0GV85 526 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 POM121CA8CG34 1229 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 FKBP6O75344 327 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 TOX4O94842 621 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms