RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RASSF4Q9H2L5 321 aa17.4■□□□□ 0.38
HMGA2-211ENST00000545998 GPR84Q9NQS5 396 aa17.4■□□□□ 0.38
HMGA2-211ENST00000545998 DECR2Q9NUI1 292 aa17.4■□□□□ 0.38
HMGA2-211ENST00000545998 MRPL15Q9P015 296 aaKnown RBP17.4■□□□□ 0.38
HMGA2-211ENST00000545998 EXOSC1Q9Y3B2 195 aaKnown RBP17.4■□□□□ 0.38
HMGA2-211ENST00000545998 H0YL77 283 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 MLNRO43193 412 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 ACKR3P25106 362 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 FDX2Q6P4F2 183 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 CLEC2AQ6UVW9 174 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 PRSS35Q8N3Z0 413 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 OR10AD1Q8NGE0 317 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 UBASH3BQ8TF42 649 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 Q96MF0 132 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 SAP30LQ9HAJ7 183 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 MYOZ1Q9NP98 299 aaPredicted RBP17.39■□□□□ 0.37
HMGA2-211ENST00000545998 PCDHGB5Q9Y5G0 923 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 TANC2Q9HCD6 1990 aa17.39■□□□□ 0.37
HMGA2-211ENST00000545998 MYL12AP19105 171 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 TNFSF4P23510 183 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 DSCR9P59020 149 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 MRPS11P82912 194 aaKnown RBP17.38■□□□□ 0.37
HMGA2-211ENST00000545998 TNFAIP6P98066 277 aaPredicted RBP17.38■□□□□ 0.37
HMGA2-211ENST00000545998 SPRNQ5BIV9 151 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 WDR38Q5JTN6 314 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 AHSA2Q719I0 299 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 ZNF786Q8N393 782 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 ZNF540Q8NDQ6 660 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 OR2G2Q8NGZ5 317 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 EGLN1Q9GZT9 426 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 SLC22A4Q9H015 551 aa17.38■□□□□ 0.37
HMGA2-211ENST00000545998 LOC390937A0A1W2PQ73 354 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 LYNX1G3V0Z9 82 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 TPD52L2O43399 206 aaKnown RBP17.37■□□□□ 0.37
HMGA2-211ENST00000545998 HLA-DPB1P04440 258 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 CSF3P09919 207 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 LYNX1P0DP58 116 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 CA6P23280 308 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 KIR3DL2P43630 455 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 NANOS3P60323 173 aaKnown RBP17.37■□□□□ 0.37
HMGA2-211ENST00000545998 COMMD2Q86X83 199 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 CSNK2A3Q8NEV1 391 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 RDH5Q92781 318 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 ITFG2Q969R8 447 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 FRRS1LQ9P0K9 344 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 IL19Q9UHD0 177 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 CLEC2DQ9UHP7 191 aa17.37■□□□□ 0.37
HMGA2-211ENST00000545998 CAB39Q9Y376 341 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-211ENST00000545998 DYSFO75923 2080 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 A0A1B0GTI1 187 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 DENRO43583 198 aaKnown RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 HTR1AP08908 422 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 CCDC159P0C7I6 412 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 ATP6V1B1P15313 513 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 COL8A2P25067 703 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 PDLIM4P50479 330 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 TGIF2LYQ8IUE0 185 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 STX19Q8N4C7 294 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 PLPP7Q8NBV4 271 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 FAM168AQ92567 244 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 YIPF5Q969M3 257 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 FAM71F1Q96KD3 344 aaPredicted RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 SCN3BQ9NY72 215 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 F8P00451 2351 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 ANKRD30BLA7E2S9 258 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 E9PI62 339 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 P2RY10O00398 339 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 GMDSO60547 372 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 CCL1P22362 96 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 C21orf33P30042 268 aaPredicted RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 CRYBB2P43320 205 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 MRPL28Q13084 256 aaKnown RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 MED21Q13503 144 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 OR8G1Q15617 311 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 ODF4Q2M2E3 257 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 OR2G6Q5TZ20 316 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 TMPRSS11AQ6ZMR5 421 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 Q6ZSR3 168 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 KRT74Q7RTS7 529 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 KLHL36Q8N4N3 616 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 C10orf105Q8TEF2 133 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 ITLN1Q8WWA0 313 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 OR2V2Q96R30 315 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 ADAT1Q9BUB4 502 aaKnown RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 Q9H521 79 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 PAK1IP1Q9NWT1 392 aaPredicted RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 CHCHD3Q9NX63 227 aaKnown RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 NOP16Q9Y3C1 178 aaKnown RBP17.36■□□□□ 0.37
HMGA2-211ENST00000545998 RHBDD3Q9Y3P4 386 aa17.36■□□□□ 0.37
HMGA2-211ENST00000545998 IGHV4-30-2A0A087WSY4 118 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 IGHV1-69-2A0A0G2JMI3 117 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 TRIM64A6NGJ6 449 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 TRIM64BA6NI03 449 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 PTGES3LE9PB15 166 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 F5H5P2 479 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 DHRS3O75911 302 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 MAP2K3P46734 347 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 CCR9P51686 369 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 SLC35A2P78381 396 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 CARTPTQ16568 116 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms