RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 AQP12AQ8IXF9 295 aa17.56■□□□□ 0.4
SCARB1-210ENST00000545493 C3orf56Q8N813 242 aa17.56■□□□□ 0.4
SCARB1-210ENST00000545493 BOLLQ8N9W6 283 aaKnown RBP17.56■□□□□ 0.4
SCARB1-210ENST00000545493 OTULINQ96BN8 352 aa17.56■□□□□ 0.4
SCARB1-210ENST00000545493 ZMYND19Q96E35 227 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-210ENST00000545493 TECTBQ96PL2 329 aa17.56■□□□□ 0.4
SCARB1-210ENST00000545493 MS4A7Q9GZW8 240 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-210ENST00000545493 PDP1Q9P0J1 537 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-210ENST00000545493 ZNF319Q9P2F9 582 aa17.56■□□□□ 0.4
SCARB1-210ENST00000545493 OOEPA6NGQ2 149 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 TNFRSF13BO14836 293 aaPredicted RBP17.55■□□□□ 0.4
SCARB1-210ENST00000545493 SELENOFO60613 162 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 GRPP07492 148 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 HKR1P10072 659 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 SLC15A1P46059 708 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 FGF12P61328 243 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 OR8B8Q15620 311 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 FAM57BQ71RH2 274 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 SPERTQ8NA61 448 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 SGK3Q96BR1 496 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 OR51V1Q9H2C8 321 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 PPP1R3EQ9H7J1 279 aa17.55■□□□□ 0.4
SCARB1-210ENST00000545493 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.54■□□□□ 0.4
SCARB1-210ENST00000545493 A6NLC8 198 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 ENSAO43768 121 aaKnown RBP17.54■□□□□ 0.4
SCARB1-210ENST00000545493 RNASE1P07998 156 aaKnown RBP17.54■□□□□ 0.4
SCARB1-210ENST00000545493 POU1F1P28069 291 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 NPY4RP50391 375 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 KCNJ8Q15842 424 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 GFOD2Q3B7J2 385 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 PLBD1Q6P4A8 553 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 BRD3OSQ6XYD6 125 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 FAM90A1Q86YD7 464 aa17.54■□□□□ 0.4
SCARB1-210ENST00000545493 TRAV38-1A0A0B4J264 116 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 hCG_1807616A0A1W2PRN6 198 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 ANKRD30BLA7E2S9 258 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 ADAM20O43506 726 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 GYPAP02724 150 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 DDOSTP39656 456 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 CSNK2BP67870 215 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 GINS1Q14691 196 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 SLC9A3R2Q15599 337 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 TEX36Q5VZQ5 186 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 SHFQ7M4L6 423 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 C11orf53Q8IXP5 236 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 BBS1Q8NFJ9 593 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 OTOSQ8NHW6 89 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 C14orf119Q9NWQ9 140 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 KLHDC2Q9Y2U9 406 aa17.53■□□□□ 0.4
SCARB1-210ENST00000545493 IGHV3OR15-7A0A075B7D8 119 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 A0A1B0GW55 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 PRR23D1E9PI22 279 aaPredicted RBP17.52■□□□□ 0.4
SCARB1-210ENST00000545493 CLDN34H7C241 214 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 GNGT2O14610 69 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 LHBP01229 141 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 LYNP07948 512 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 SFTPBP07988 381 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L2P0CJ85 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L3P0CJ86 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L4P0CJ87 422 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L5P0CJ88 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L6P0CJ89 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L7P0CJ90 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 PRR23D2P0DMB1 279 aaPredicted RBP17.52■□□□□ 0.4
SCARB1-210ENST00000545493 OSMP13725 252 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 MMP9P14780 707 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 PAICSP22234 425 aaKnown RBP17.52■□□□□ 0.4
SCARB1-210ENST00000545493 CFHR2P36980 270 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 NAA10P41227 235 aaPredicted RBP17.52■□□□□ 0.4
SCARB1-210ENST00000545493 GSK3AP49840 483 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 MZT1Q08AG7 82 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 FLOT2Q14254 428 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4L9Q6RFH8 374 aaPredicted RBP17.52■□□□□ 0.4
SCARB1-210ENST00000545493 RHOUQ7L0Q8 258 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 TRPM8Q7Z2W7 1104 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 OR1M1Q8NGA1 313 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 OR52H1Q8NGJ2 320 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 OR8S1Q8NH09 359 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 OR10A2Q9H208 303 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 BRD7Q9NPI1 651 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 TRIM36Q9NQ86 728 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 ERVK-18Q9QC07 812 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 DUX4Q9UBX2 424 aa17.52■□□□□ 0.4
SCARB1-210ENST00000545493 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-210ENST00000545493 PRODHO43272 600 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 FKBP6O75344 327 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 E2F6O75461 281 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 APOC1P02654 83 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 H2BFMP0C1H6 154 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 SLC2A5P22732 501 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 MTNR1AP48039 350 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 ELF3P78545 371 aaPredicted RBP17.51■□□□□ 0.39
SCARB1-210ENST00000545493 CDK5Q00535 292 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 DNAL1Q4LDG9 190 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 RUSC1-AS1Q66K80 236 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 SPATA24Q86W54 205 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 LRRC29Q8WV35 223 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 TAF15Q92804 592 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCARB1-210ENST00000545493 PGAM5Q96HS1 289 aa17.51■□□□□ 0.39
SCARB1-210ENST00000545493 TBX15Q96SF7 602 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms