RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SNAI3Q3KNW1 292 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 SLC36A3Q495N2 470 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 STUMQ69YW2 141 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 DNM1P34Q6PK57 102 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 WDR82Q6UXN9 313 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 SPSB4Q96A44 273 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 ZNF799Q96GE5 643 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 MAP6Q96JE9 813 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 CLPTM1LQ96KA5 538 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 PITX2Q99697 317 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 CDCA4Q9BXL8 241 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 NDEL1Q9GZM8 345 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 NPFFR1Q9GZQ6 430 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 ADA2Q9NZK5 511 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 TMEM5Q9Y2B1 443 aa11.95□□□□□ -0.5
RTN3-214ENST00000545432 SF3B6Q9Y3B4 125 aaKnown RBP11.95□□□□□ -0.5
RTN3-214ENST00000545432 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.94□□□□□ -0.5
RTN3-214ENST00000545432 GGT3PA6NGU5 568 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 BHLHE40O14503 412 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 ARPC3O15145 178 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 VSIG10L2P0DP72 767 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 IGLL1P15814 213 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 GRK5P34947 590 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 DDOSTP39656 456 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 OMPP47874 163 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 CAV3P56539 151 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 LY6EQ16553 131 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 LRRC10Q5BKY1 277 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 COQ5Q5HYK3 327 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 PGBD2Q6P3X8 592 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
RTN3-214ENST00000545432 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 LINC00346Q8IVM7 164 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 OR1M1Q8NGA1 313 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 LRRC29Q8WV35 223 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 RORBQ92753 470 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
RTN3-214ENST00000545432 OCSTAMPQ9BR26 566 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 OPA3Q9H6K4 179 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 TMBIM4Q9HC24 238 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
RTN3-214ENST00000545432 DYNC2H1Q8NCM8 4307 aaKnown RBP11.94□□□□□ -0.5
RTN3-214ENST00000545432 EPPK1P58107 5090 aaKnown RBP11.94□□□□□ -0.5
RTN3-214ENST00000545432 A6NLC8 198 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 VGLL3A8MV65 326 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 SOCS2O14508 198 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 IFNW1P05000 195 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 FAHP16930 419 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 NOS3P29474 1203 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 RPS6KA3P51812 740 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 CD83Q01151 205 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 EGFEM1PQ0D2K5 195 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 GLYATL3Q5SZD4 288 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 DRAM2Q6UX65 266 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 OR51G2Q8NGK0 314 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 OR2AE1Q8NHA4 323 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 TPD52L3Q96J77 140 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 B9D2Q9BPU9 175 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 SRA1Q9HD15 236 aaKnown RBP11.93□□□□□ -0.5
RTN3-214ENST00000545432 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
RTN3-214ENST00000545432 hCG_1807616A0A1W2PRN6 198 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 A0A1W2PRQ8 180 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 FAM90A8PA6NJQ4 464 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 FAM220BPB1ANY3 271 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 TIPRLO75663 272 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 SELLP14151 372 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 NAA10P41227 235 aaPredicted RBP11.92□□□□□ -0.5
RTN3-214ENST00000545432 KRTAP10-11P60412 298 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 MXRA7P84157 204 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 DGCR6Q14129 220 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 LRRC23Q53EV4 343 aaPredicted RBP11.92□□□□□ -0.5
RTN3-214ENST00000545432 METTL21CQ5VZV1 264 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 VTCN1Q7Z7D3 282 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 C11orf42Q8N5U0 333 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 OR56B2PQ8NGI1 322 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 OR10Z1Q8NGY1 313 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 OR2AJ1Q8NGZ0 328 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 LZICQ8WZA0 190 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 SPTSSAQ969W0 71 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
RTN3-214ENST00000545432 RAB3IPQ96QF0 476 aaPredicted RBP11.92□□□□□ -0.5
RTN3-214ENST00000545432 MRPL22Q9NWU5 206 aaKnown RBP11.92□□□□□ -0.5
RTN3-214ENST00000545432 HAO2Q9NYQ3 351 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 CAPN7Q9Y6W3 813 aa11.92□□□□□ -0.5
RTN3-214ENST00000545432 SIGLEC5O15389 551 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 IKZF1Q13422 519 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 DGUOKQ16854 277 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 FAM76BQ5HYJ3 339 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 DPY19L4Q7Z388 723 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.91□□□□□ -0.5
RTN3-214ENST00000545432 CYB561A3Q8NBI2 242 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 ANGPTL6Q8NI99 470 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 DUS3LQ96G46 650 aaKnown RBP11.91□□□□□ -0.5
RTN3-214ENST00000545432 MED30Q96HR3 178 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms