RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR2G2Q8NGZ5 317 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF649Q9BS31 505 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 TTTY10Q9BZA0 68 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 G6PC2Q9NQR9 355 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 PLEKHA6Q9Y2H5 1048 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 LRCH1Q9Y2L9 728 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 MPC1Q9Y5U8 109 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 hCG_38984A0A1B0GV85 526 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 PRR32B1ATL7 298 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 IFNL4K9M1U5 179 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 CLPTM1O96005 669 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 TTRP02766 147 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 CD1AP06126 327 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 GNALP38405 381 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 MPV17P39210 176 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 GSK3AP49840 483 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 ETV1P50549 477 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 MMP15P51511 669 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 EFNA4P52798 201 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 FAM3AP98173 230 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 ACSM1Q08AH1 577 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 RIPPLY1Q0D2K3 151 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 HLXQ14774 488 aaPredicted RBP14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 OR2T2Q6IF00 324 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 KRT74Q7RTS7 529 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 CELF2-AS1Q8N7Q2 184 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 SEMA6DQ8NFY4 1073 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 TECTBQ96PL2 329 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 FOXC2Q99958 501 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 VRK1Q99986 396 aaPredicted RBP14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 NEK6Q9HC98 313 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 DECR2Q9NUI1 292 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 SLC22A13Q9Y226 551 aa14.97□□□□□ -0.01
CLSTN3-210ENST00000540931 A0A1B0GWJ7 208 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 SYT7O43581 403 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 PNPP00491 289 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 F12P00748 615 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 SERPINA3P01011 423 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 IGLV3-1P01715 115 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 CD55P08174 381 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 ADRA2AP08913 450 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 CCL1P22362 96 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 C21orf33P30042 268 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 SRP9P49458 86 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 CDH15P55291 814 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 GPR50Q13585 617 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 GFOD2Q3B7J2 385 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 SHEQ5VZ18 495 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 Q6ZSR3 168 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 LRP11Q86VZ4 500 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF676Q8N7Q3 588 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 PLPP7Q8NBV4 271 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 OR5AK2Q8NH90 309 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 OR2AE1Q8NHA4 323 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 ERGIC1Q969X5 290 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 HIST1H2AAQ96QV6 131 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 SLC30A2Q9BRI3 323 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 CCDC90BQ9GZT6 254 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 PLEKHA1Q9HB21 404 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 ISYNA1Q9NPH2 558 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 GPR84Q9NQS5 396 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 C14orf119Q9NWQ9 140 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 IL19Q9UHD0 177 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 ENPP5Q9UJA9 477 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 FZR1Q9UM11 496 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 HHLA2Q9UM44 414 aa14.96□□□□□ -0.01
CLSTN3-210ENST00000540931 TRBV2A0A0J9YWF9 115 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF816-ZNF321PA0A0X1KG74 233 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 ANXA2P2A6NMY6 339 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 TNFAIP8O95379 198 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 CST4P01036 141 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 ACHEP22303 614 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 ATP5J2P56134 94 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 MVKQ03426 396 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 KCTD21Q4G0X4 260 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 OR51E1Q8TCB6 317 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 FCGR1BQ92637 280 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 LIME1Q9H400 295 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 DLL4Q9NR61 685 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 UBAP1Q9NZ09 502 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 FRRS1LQ9P0K9 344 aa14.95□□□□□ -0.02
CLSTN3-210ENST00000540931 NAV3Q8IVL0 2385 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 MAGEB4O15481 346 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 ALDH3B1P43353 468 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 PTH2RP49190 550 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 SLC3A1Q07837 685 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 MFGE8Q08431 387 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 SPHARQ15513 63 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 TBCEQ15813 527 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 MSMPQ1L6U9 139 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 WDR38Q5JTN6 314 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 OR56B2PQ8NGI1 322 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 PP6455Q8WZ26 134 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 SMIM19Q96E16 107 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 ELMOD3Q96FG2 381 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 POFUT1Q9H488 388 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 ISG20L2Q9H9L3 353 aaKnown RBP14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 ZNF319Q9P2F9 582 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 SPG11Q96JI7 2443 aa14.94□□□□□ -0.02
CLSTN3-210ENST00000540931 NDUFS8O00217 210 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms