RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 DEFB126Q9BYW3 111 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TREM1Q9NP99 234 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TNFSF18Q9UNG2 199 aa12.48□□□□□ -0.41
INO80E-203ENST00000540562 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 MEGF11A6BM72 1044 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 EFSO43281 561 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 GUSBP08236 651 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 IFI6P09912 130 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 GLB1P16278 677 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 RCC1P18754 421 aaPredicted RBP12.47□□□□□ -0.41
INO80E-203ENST00000540562 BLVRBP30043 206 aaPredicted RBP12.47□□□□□ -0.41
INO80E-203ENST00000540562 GPR85P60893 370 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 SP6Q3SY56 376 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 C5orf24Q7Z6I8 188 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 ZFP82Q8N141 532 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 ZNF441Q8N8Z8 693 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 ZNF385AQ96PM9 386 aaKnown RBP12.47□□□□□ -0.41
INO80E-203ENST00000540562 LPAR5Q9H1C0 372 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 RABL2AQ9UBK7 228 aaPredicted RBP12.47□□□□□ -0.41
INO80E-203ENST00000540562 RABL2BQ9UNT1 228 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 LAMA5O15230 3695 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 A0A1W2PQD3 144 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 A6NIZ1 184 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 LDLRAD4O15165 306 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 SPRY1O43609 319 aaPredicted RBP12.47□□□□□ -0.41
INO80E-203ENST00000540562 MGMTP16455 207 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
INO80E-203ENST00000540562 TMEM50BP56557 158 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 RAP1BP61224 184 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 RAP1AP62834 184 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 CCL7P80098 99 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 CLVS2Q5SYC1 327 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 SLC6A15Q9H2J7 730 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 GAREM1Q9H706 876 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 CACNA1GO43497 2377 aa12.47□□□□□ -0.41
INO80E-203ENST00000540562 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 CCDC163A0A0D9SF12 145 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 A0A1B0GTI1 187 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 FAM230AA0A1W2PPH8 454 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 H0YIZ8 118 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 NUDT21O43809 227 aaKnown RBP12.46□□□□□ -0.41
INO80E-203ENST00000540562 IGHG1P01857 330 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 FXYD4P59646 89 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 LPAL2Q16609 132 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 PHYHD1Q5SRE7 291 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 C9orf135Q5VTT2 229 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 ZNF585AQ6P3V2 769 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.41
INO80E-203ENST00000540562 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 GVINP1Q7Z2Y8 2422 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 IGKV1-9A0A0C4DH69 117 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 OR6C65A6NJZ3 312 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 KRBOX1C9JBD0 128 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 SERPINA5P05154 406 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 SRFP11831 508 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 FCGR2AP12318 317 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 CNR1P21554 472 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 RPL35P42766 123 aaKnown RBP12.46□□□□□ -0.41
INO80E-203ENST00000540562 ASCL1P50553 236 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 PPIAP62937 165 aaKnown RBP12.46□□□□□ -0.41
INO80E-203ENST00000540562 SCRN3Q0VDG4 424 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 MFSD8Q8NHS3 518 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
INO80E-203ENST00000540562 BCL2L11O43521 198 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 IGLV3-19P01714 112 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 MMP16P51512 607 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.42
INO80E-203ENST00000540562 SLC25A42Q86VD7 318 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 OR5AS1Q8N127 324 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.42
INO80E-203ENST00000540562 GPHA2Q96T91 129 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 ZNF768Q9H5H4 540 aaKnown RBP12.46□□□□□ -0.42
INO80E-203ENST00000540562 GPR173Q9NS66 373 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 HPF1Q9NWY4 346 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 RASL12Q9NYN1 266 aa12.46□□□□□ -0.42
INO80E-203ENST00000540562 TO15178 435 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 TNRC18O15417 2968 aaPredicted RBP12.45□□□□□ -0.42
INO80E-203ENST00000540562 CDC14BO60729 498 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 ACTL6AO96019 429 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 CFIP05156 583 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 NME2P22392 152 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 RFC3P40938 356 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 AFF3P51826 1226 aaKnown RBP12.45□□□□□ -0.42
INO80E-203ENST00000540562 PLPPR5Q32ZL2 321 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 ANKRD55Q3KP44 614 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 CLEC18BQ6UXF7 455 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 OR5H2Q8NGV7 314 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 MVB12AQ96EY5 273 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 C12orf10Q9HB07 376 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 ZNF160Q9HCG1 818 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 ESPL1Q14674 2120 aa12.45□□□□□ -0.42
INO80E-203ENST00000540562 FOSL2P15408 326 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms