RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	OR6K6	Q8NGW6	343 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SGMS2	Q8NHU3	365 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TEX47	Q8TBZ9	253 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CANT1	Q8WVQ1	401 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CLPTM1L	Q96KA5	538 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	INTS14	Q96SY0	518 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	AMELY	Q99218	206 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF747	Q9BV97	191 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TLNRD1	Q9H1K6	362 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	RNPEPL1	Q9HAU8	725 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	C14orf119	Q9NWQ9	140 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF319	Q9P2F9	582 aa		10.89	□□□□□ -0.67
SEMA4D-223	ENST00000540475	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	FAM183A	A6NL82	134 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ENSA	O43768	121 aa	Known RBP	10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	OSM	P13725	252 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	MMP9	P14780	707 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CFL1	P23528	166 aa	Known RBP	10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	HOXA4	Q00056	320 aa	Predicted RBP	10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	BAMBI	Q13145	260 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SLC9A3R2	Q15599	337 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	OR8B8	Q15620	311 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	WDR86	Q86TI4	376 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	IQCF1	Q8N6M8	205 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF454	Q8N9F8	522 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	C19orf18	Q8NEA5	215 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	OTOS	Q8NHW6	89 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	REEP6	Q96HR9	211 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	LRGUK	Q96M69	825 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	DMRTB1	Q96MA1	342 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	THTPA	Q9BU02	230 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	RGCC	Q9H4X1	137 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	MED20	Q9H944	212 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	C1orf123	Q9NWV4	160 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	FAM53C	Q9NYF3	392 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ERVK-18	Q9QC07	812 aa		10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SOX21	Q9Y651	276 aa	Predicted RBP	10.88	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ANKRD30BL	A7E2S9	258 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF879	B4DU55	563 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475		H3BN98	237 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PRODH	O43272	600 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TIPRL	O75663	272 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	HMGN1	P05114	100 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SLC2A5	P22732	501 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	HSD11B1	P28845	292 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	GSK3A	P49840	483 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF121	P58317	390 aa	Predicted RBP	10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	FGF12	P61328	243 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	GINS1	Q14691	196 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SNCB	Q16143	134 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TIGD6	Q17RP2	521 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	FAM76B	Q5HYJ3	339 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SLC35D3	Q5M8T2	416 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF826P	Q6ZT77	177 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	FAM90A1	Q86YD7	464 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ERI1	Q8IV48	349 aa	Known RBP	10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	GALNT4	Q8N4A0	578 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CSNK2A3	Q8NEV1	391 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	OR6N2	Q8NGY6	317 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ITFG2	Q969R8	447 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SLC25A28	Q96A46	364 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CCDC124	Q96CT7	223 aa	Known RBP	10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SMURF1	Q9HCE7	757 aa		10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PDP1	Q9P0J1	537 aa	Predicted RBP	10.87	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TRAV40	A0A0B4J280	105 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TCRBV3S1	A0A5B6	114 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PRR23D1	E9PI22	279 aa	Predicted RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	C3orf80	F5H4A9	247 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	P2RY10	O00398	339 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ECD	O95905	644 aa	Predicted RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CST4	P01036	141 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ANXA2	P07355	339 aa	Known RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	GRP	P07492	148 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	LYN	P07948	512 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ANXA8	P13928	327 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	MUC1	P15941	1255 aa	Predicted RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PAICS	P22234	425 aa	Known RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PLBD1	Q6P4A8	553 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	WDR82	Q6UXN9	313 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SPATC1	Q76KD6	591 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	PNLDC1	Q8NA58	520 aa	Known RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	LY6G5B	Q8NDX9	201 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	OR1M1	Q8NGA1	313 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	C12orf43	Q96C57	262 aa	Known RBP	10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ITPKC	Q96DU7	683 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	NRBF2	Q96F24	287 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	TBX15	Q96SF7	602 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	OR10A2	Q9H208	303 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	SLC25A19	Q9HC21	320 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	NOX4	Q9NPH5	578 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ZNF391	Q9UJN7	358 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	MGAM2	Q2M2H8	2515 aa		10.86	□□□□□ -0.67
SEMA4D-223	ENST00000540475	CENPVL3	A0A0U1RRI6	287 aa		10.85	□□□□□ -0.67
SEMA4D-223	ENST00000540475	ACOD1	A6NK06	481 aa		10.85	□□□□□ -0.67
SEMA4D-223	ENST00000540475	POM121C	A8CG34	1229 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms