RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PRAMEF8Q5VWM4 474 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 PRAMEF7Q5VXH5 474 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ULK3Q6PHR2 472 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 TRAPPC6BQ86SZ2 158 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ZNF547Q8IVP9 402 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 PACRGQ96M98 296 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 JSRP1Q96MG2 331 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 LRFN5Q96NI6 719 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 OR11A1Q9GZK7 315 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 SIRT7Q9NRC8 400 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 GOLT1BQ9Y3E0 138 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 B3GALT1Q9Y5Z6 326 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 A0A0A6YYC8 382 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 C9orf170A2RU37 121 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 I3L1I5 382 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 FGF16O43320 207 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 B3GALT2O43825 422 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 DFFBO76075 338 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 PNLIPP16233 465 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 TACR3P29371 465 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 FOLR3P41439 243 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 HSD11B2P80365 405 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 GPR18Q14330 331 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 COMMD2Q86X83 199 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ZNF511Q8NB15 262 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 PLPP7Q8NBV4 271 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 PLPP5Q8NEB5 264 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 DNAJA3Q96EY1 480 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 MISP3Q96FF7 219 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 SLC35A4Q96G79 324 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 INSM2Q96T92 566 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 TMEM14AQ9Y6G1 99 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ELOA3CA0A087WX78 387 aaPredicted RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 A0A1W2PS29 197 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 J3QKU1 62 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 SCAF4O95104 1147 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 HIST1H1CP16403 213 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 BCL6P41182 706 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 MRPL2Q5T653 305 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 ABHD17CQ6PCB6 329 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 TMEM64Q6YI46 380 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ZNF793Q6ZN11 406 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ZNF705AQ6ZN79 300 aaPredicted RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 MRPL41Q8IXM3 137 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 ZNF101Q8IZC7 436 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 OR4S1Q8NGB4 309 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 FAM213BQ8TBF2 198 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 TAAR8Q969N4 342 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 FAM46BQ96A09 425 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 FKRPQ9H9S5 495 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 C20orf141Q9NUB4 165 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 PTRH2Q9Y3E5 179 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 RP1P56715 2156 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ATG2AQ2TAZ0 1938 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 BHLHE40O14503 412 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 XKRYO14609 159 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 TGOLN2O43493 480 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 AHSA1O95433 338 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 RENP00797 406 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 CD14P08571 375 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 CD79AP11912 226 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 EDN3P14138 238 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 VAMP2P63027 116 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 RASGEF1BQ0VAM2 473 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 LY6G6FQ5SQ64 297 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 RPUSD3Q6P087 351 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 SLC48A1Q6P1K1 146 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 NPRL2Q8WTW4 380 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 MITD1Q8WV92 249 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 RAB39BQ96DA2 213 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 NIPSNAP3BQ9BS92 247 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ATG101Q9BSB4 218 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ALG12Q9BV10 488 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 SLC35B3Q9H1N7 401 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 C14orf166Q9Y224 244 aaKnown RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 ZNF705FA8MVS1 300 aaPredicted RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 M0R143 59 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ITGB2P05107 769 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 ZNF705DP0CH99 300 aaPredicted RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 ZNF705BP0CI00 300 aaPredicted RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 SERPINA2P20848 420 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 LPAR6P43657 344 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 DIO1P49895 249 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 IDH3GP51553 393 aaPredicted RBP7.78□□□□□ -1.16
DDB1-217ENST00000540166 GLYATL3Q5SZD4 288 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 RFLNBQ8N5W9 214 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 SLC41A2Q96JW4 573 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 FER1L6-AS2Q96M78 137 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 PTGES2Q9H7Z7 377 aa7.78□□□□□ -1.16
DDB1-217ENST00000540166 SCN2AQ99250 2005 aa7.77□□□□□ -1.16
DDB1-217ENST00000540166 TLCD2A6NGC4 264 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 TMEM212A6NML5 194 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 SOX15O60248 233 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 AGFG2O95081 481 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 KNG1P01042 644 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 KCNAB1Q14722 419 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 SHBQ15464 509 aa7.77□□□□□ -1.17
DDB1-217ENST00000540166 MOGAT2Q3SYC2 334 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms