RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ACKR4Q9NPB9 350 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ZFP57Q9NU63 452 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 OR5AC2Q9NZP5 309 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 A0A1W2PNV4 684 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 MFNGO00587 321 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 MBTPS2O43462 519 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 RAD51DO75771 328 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 CSTBP04080 98 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 NPBWR1P48145 328 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 CSNK1EP49674 416 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 ARL4DP49703 201 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 CAV2P51636 162 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 EIF5AP63241 154 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 RNF4P78317 190 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 ANKRD55Q3KP44 614 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 Q7L0L9 218 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 PRSS58Q8IYP2 241 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 DMBX1Q8NFW5 382 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 OR5H2Q8NGV7 314 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 RHBDD1Q8TEB9 315 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 OR10C1Q96KK4 312 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 EMC6Q9BV81 110 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 TMEM59Q9BXS4 323 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 NKX2-4Q9H2Z4 354 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 RHOFQ9HBH0 211 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 SLC2A4RGQ9NR83 387 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 SERINC1Q9NRX5 453 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 ALKBH4Q9NXW9 302 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 COA4Q9NYJ1 87 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 RCC2Q9P258 522 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 OSGIN2Q9Y236 505 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 RPH3AQ9Y2J0 694 aaPredicted RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 WIF1Q9Y5W5 379 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 LHFPL6Q9Y693 200 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 C2orf72A6NCS6 295 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 SHISA7A6NL88 538 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 ZNF878C9JN71 531 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 TAAR5O14804 337 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 ZNF354AO60765 605 aaPredicted RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 HOXB1P14653 301 aaPredicted RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 OR3A4PP47883 348 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 EIF5AL1Q6IS14 154 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 LANCL3Q6ZV70 420 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 CARFQ8N187 725 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 FAM89BQ8N5H3 189 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 POC1AQ8NBT0 407 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 BHLHE23Q8NDY6 225 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 OR2AJ1Q8NGZ0 328 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 OR13G1Q8NGZ3 307 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 GLYATL2Q8WU03 294 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 SPACA5Q96QH8 159 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 NRIP2Q9BQI9 281 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 URM1Q9BTM9 101 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 BANF2Q9H503 90 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 ESRP2Q9H6T0 727 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 METTL8Q9H825 291 aaKnown RBP8.55□□□□□ -1.04
CDH13-204ENST00000539548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.55□□□□□ -1.04
CDH13-204ENST00000539548 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
CDH13-204ENST00000539548 VSTM2BA6NLU5 285 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 RHPN2P1A8MT19 583 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 EFNA2O43921 213 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 F12P00748 615 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 PET100P0DJ07 73 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 GIMD1P0DJR0 217 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 FOSL2P15408 326 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 ZNF17P17021 662 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 AMY2BP19961 511 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 CCL1P22362 96 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 AKR1D1P51857 326 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 FBXW4P57775 412 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 B2MP61769 119 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 GFOD2Q3B7J2 385 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 C14orf28Q4W4Y0 310 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 AVPI1Q5T686 147 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 AADACL3Q5VUY0 350 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 SKA3Q8IX90 412 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 D2HGDHQ8N465 521 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 OR8B12Q8NGG6 310 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 SSC4DQ8WTU2 575 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 ZNF775Q96BV0 537 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 ARHGAP5-AS1Q96IT6 56 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 MICU1Q9BPX6 476 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 DUSP15Q9H1R2 295 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 ZNF768Q9H5H4 540 aaKnown RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 TMEM231Q9H6L2 316 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 GPR84Q9NQS5 396 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 B3GAT1Q9P2W7 334 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 A0A1W2PR77 199 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 RNASEK-C17orf49H0YIS7 233 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 CRTAPO75718 401 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 CRYBA1P05813 215 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 RPS2P15880 293 aaKnown RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 MUC1P15941 1255 aaPredicted RBP8.54□□□□□ -1.04
CDH13-204ENST00000539548 PI3P19957 117 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 CD38P28907 300 aa8.54□□□□□ -1.04
CDH13-204ENST00000539548 OR3A2P47893 321 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms