RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SHFQ7M4L6 423 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 SLC16A9Q7RTY1 509 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 TMEM179BQ7Z7N9 219 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 TIGD4Q8IY51 512 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 REEP6Q96HR9 211 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 C1orf147Q96MC9 270 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-206ENST00000539320 TECTBQ96PL2 329 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 DUX5Q96PT3 197 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 OR51V1Q9H2C8 321 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 DNAJC27Q9NZQ0 273 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 PDP1Q9P0J1 537 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-206ENST00000539320 CTSZQ9UBR2 303 aa18.49■□□□□ 0.55
SCARB1-206ENST00000539320 TRAV38-1A0A0B4J264 116 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 hCG_38984A0A1B0GV85 526 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 hCG_1807616A0A1W2PRN6 198 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 OOEPA6NGQ2 149 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 E2F6O75461 281 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 GRPP07492 148 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 OPRL1P41146 370 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 MTNR1AP48039 350 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 ZNF121P58317 390 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-206ENST00000539320 FAM3AP98173 230 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 OR8B8Q15620 311 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 FAM57BQ71RH2 274 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 OR8S1Q8NH09 359 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 AMELYQ99218 206 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 ERVK-18Q9QC07 812 aa18.48■□□□□ 0.55
SCARB1-206ENST00000539320 PRR23D1E9PI22 279 aaPredicted RBP18.47■□□□□ 0.55
SCARB1-206ENST00000539320 ADAM20O43506 726 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 PRR23D2P0DMB1 279 aaPredicted RBP18.47■□□□□ 0.55
SCARB1-206ENST00000539320 HKR1P10072 659 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 CFL1P23528 166 aaKnown RBP18.47■□□□□ 0.55
SCARB1-206ENST00000539320 FGF12P61328 243 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 DNAL1Q4LDG9 190 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 PLBD1Q6P4A8 553 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 ZNF826PQ6ZT77 177 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 PRSS45Q7RTY3 260 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 OR52H1Q8NGJ2 320 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 OR10A2Q9H208 303 aa18.47■□□□□ 0.55
SCARB1-206ENST00000539320 H2BFMP0C1H6 154 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 OSMP13725 252 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 FLOT2Q14254 428 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 GINS1Q14691 196 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 GFOD2Q3B7J2 385 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 RHOUQ7L0Q8 258 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 TRPM8Q7Z2W7 1104 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 GCSAMQ8N6F7 178 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 SGK3Q96BR1 496 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 PGAM5Q96HS1 289 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 ZNF556Q9HAH1 456 aa18.46■□□□□ 0.55
SCARB1-206ENST00000539320 CLDN34H7C241 214 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 NDUFA2O43678 99 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 SELENOFO60613 162 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 HMGN1P05114 100 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 RNASE1P07998 156 aaKnown RBP18.45■□□□□ 0.54
SCARB1-206ENST00000539320 EGR1P18146 543 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 FOXL1Q12952 345 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 CD276Q5ZPR3 534 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 SPATA24Q86W54 205 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 HS3ST5Q8IZT8 346 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 ZNF454Q8N9F8 522 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 OTOSQ8NHW6 89 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 RGCCQ9H4X1 137 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 YY1AP1Q9H869 796 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 BRD7Q9NPI1 651 aa18.45■□□□□ 0.54
SCARB1-206ENST00000539320 SOX21Q9Y651 276 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-206ENST00000539320 PRODHO43272 600 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 GYPAP02724 150 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 LYNP07948 512 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 GSK3AP49840 483 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 KLHL12Q53G59 568 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 GPR157Q5UAW9 335 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 WDR86Q86TI4 376 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 FAM90A1Q86YD7 464 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 CSNK2A3Q8NEV1 391 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 SLC25A28Q96A46 364 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 PAPOLGQ9BWT3 736 aaKnown RBP18.44■□□□□ 0.54
SCARB1-206ENST00000539320 SMURF1Q9HCE7 757 aa18.44■□□□□ 0.54
SCARB1-206ENST00000539320 MGAM2Q2M2H8 2515 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 TNFRSF13BO14836 293 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-206ENST00000539320 GYG2O15488 501 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 FKBP6O75344 327 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 TIPRLO75663 272 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 ANXA8P13928 327 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 CFHR2P36980 270 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 GNALP38405 381 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 NAA10P41227 235 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-206ENST00000539320 CSNK2BP67870 215 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 CBX1P83916 185 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 SLC9A3R2Q15599 337 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 SNCBQ16143 134 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 TEX36Q5VZQ5 186 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 BRD3OSQ6XYD6 125 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 CPOQ8IVL8 374 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 FTMTQ8N4E7 242 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 OR1M1Q8NGA1 313 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 LRRC29Q8WV35 223 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 RNPEPL1Q9HAU8 725 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 SLC25A19Q9HC21 320 aa18.43■□□□□ 0.54
SCARB1-206ENST00000539320 ZNF319Q9P2F9 582 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms