RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 HLA-DMAP28067 261 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 TGFBR2P37173 567 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 RAB7AP51149 207 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 CRISP1P54107 249 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 TAS2R43P59537 309 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 SEMG2Q02383 582 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 SELENBP1Q13228 472 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 ILKQ13418 452 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 TMEM220Q6QAJ8 160 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 TMPRSS11AQ6ZMR5 421 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 EIF3MQ7L2H7 374 aaKnown RBP1.59□□□□□ -2.15
CCDC7-209ENST00000539197 DAZ4Q86SG3 579 aaKnown RBP1.59□□□□□ -2.15
CCDC7-209ENST00000539197 OR1L1Q8NH94 360 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 CMTM2Q8TAZ6 248 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 FAM81AQ8TBF8 368 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 AGR3Q8TD06 166 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 RXFP4Q8TDU9 374 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 MCUR1Q96AQ8 359 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 BTN2A3PQ96KV6 586 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 RNF145Q96MT1 663 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 STACQ99469 402 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 KCNS3Q9BQ31 491 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 BPIFA3Q9BQP9 254 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 C11orf70Q9BRQ4 267 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 C20orf24Q9BUV8 137 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 EXO5Q9H790 373 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 GEMIN7Q9H840 131 aaKnown RBP1.59□□□□□ -2.15
CCDC7-209ENST00000539197 RETNQ9HD89 108 aa1.59□□□□□ -2.15
CCDC7-209ENST00000539197 DAZ1Q9NQZ3 744 aaKnown RBP1.59□□□□□ -2.15
CCDC7-209ENST00000539197 DDX18Q9NVP1 670 aaKnown RBP1.59□□□□□ -2.15
CCDC7-209ENST00000539197 PHLPP2Q6ZVD8 1323 aa1.59□□□□□ -2.16
CCDC7-209ENST00000539197 SORL1Q92673 2214 aa1.59□□□□□ -2.16
CCDC7-209ENST00000539197 GOLGA6L4A6NEF3 574 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 WRBO00258 174 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 CTAG2O75638 210 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 OR2F2O95006 317 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 HPRT1P00492 218 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 CD28P10747 220 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 ZNF35P13682 527 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 HRES1P13985 223 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 PRKACBP22694 351 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 PCK1P35558 622 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 C21orf59P57076 290 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 LIPEQ05469 1076 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 MERTKQ12866 999 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 NAB1Q13506 487 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 PYDC2Q56P42 97 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 APOBEC3HQ6NTF7 200 aaKnown RBP1.58□□□□□ -2.16
CCDC7-209ENST00000539197 TBPL2Q6SJ96 375 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 CLEC2AQ6UVW9 174 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 CD300LGQ6UXG3 332 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 CENPQQ7L2Z9 268 aaPredicted RBP1.58□□□□□ -2.16
CCDC7-209ENST00000539197 LUZP2Q86TE4 346 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 OR5K2Q8NHB8 316 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 LYPD6BQ8NI32 183 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 ENKURQ8TC29 256 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 ZBED3Q96IU2 234 aaPredicted RBP1.58□□□□□ -2.16
CCDC7-209ENST00000539197 PRRC1Q96M27 445 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 TGS1Q96RS0 853 aaKnown RBP1.58□□□□□ -2.16
CCDC7-209ENST00000539197 TAS2R5Q9NYW4 299 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 MTCH1Q9NZJ7 389 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 WDR19Q8NEZ3 1342 aa1.58□□□□□ -2.16
CCDC7-209ENST00000539197 FHOD3Q2V2M9 1422 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 CACNA1DQ01668 2161 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 TRBV11-1A0A0K0K1C0 115 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 C4orf51C9J302 202 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 RAD1O60671 282 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 LSM8O95777 96 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 TCP1P17987 556 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 CSNK2A2P19784 350 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 GTF2E2P29084 291 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 OR1E1P30953 314 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 OTX1P32242 354 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 RPS5P46782 204 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 NDUFA8P51970 172 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 RGS8P57771 180 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 TMEM53Q6P2H8 277 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 OPN5Q6U736 354 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 Q6ZSR6 202 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 BZW1Q7L1Q6 419 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 BBOF1Q8ND07 529 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 BPIFCQ8NFQ6 507 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 SLC26A10Q8NG04 563 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 OR4C5Q8NGB2 326 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 CDS1Q92903 461 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 PKMYT1Q99640 499 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 PIGUQ9H490 435 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 LINC00574Q9H8X3 128 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 BEX1Q9HBH7 125 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 MRM3Q9HC36 420 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 RRAGDQ9NQL2 400 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 RGS18Q9NS28 235 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 ASF1BQ9NVP2 202 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 HMGXB4Q9UGU5 601 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 MCTS1Q9ULC4 181 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 FARSAQ9Y285 508 aaKnown RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 CAB39Q9Y376 341 aaPredicted RBP1.57□□□□□ -2.16
CCDC7-209ENST00000539197 TTC41PQ6P2S7 1318 aa1.57□□□□□ -2.16
CCDC7-209ENST00000539197 ADGRA3Q8IWK6 1321 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms