RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR10H4Q8NGA5 316 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ARPC1AQ92747 370 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NTAN1Q96AB6 310 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 DCPSQ96C86 337 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NARS2Q96I59 477 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 BMFQ96LC9 184 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 P2RX4Q99571 388 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CHCHD7Q9BUK0 85 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 DEFB126Q9BYW3 111 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 KIAA1551Q9HCM1 1747 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF275Q9NSD4 429 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RBM22Q9NW64 420 aaKnown RBP eCLIP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 THUMPD1Q9NXG2 353 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PAQR5Q9NXK6 330 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SEC14L3Q9UDX4 400 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SLC7A11Q9UPY5 501 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ECM29Q5VYK3 1845 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 EFCAB5A4FU69 1503 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NID2Q14112 1375 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PLEKHH1Q9ULM0 1364 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZNFX1Q9P2E3 1918 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 UHRF1BP1LA0JNW5 1464 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 COL5A3P25940 1745 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 C9orf84Q5VXU9 1444 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 KIF13BQ9NQT8 1826 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV3-64DA0A0J9YX35 117 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA8QA0A0J9YX86 632 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A0A0U1RQV1 116 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1W2PPV4 95 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TRABD2BA6NFA1 517 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 H0YHG0 523 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA8RI6L899 631 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 M0QXV9 152 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PHYHO14832 338 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CIB2O75838 187 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TDP2O95551 362 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 MPIP34949 423 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ANP32AP39687 249 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CAPZBP47756 277 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CSNK1A1P48729 337 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CAV2P51636 162 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CCR8P51685 355 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TAS2R19P59542 299 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 SLC10A7Q0GE19 358 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PDIA2Q13087 525 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PIGHQ14442 188 aaPredicted RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PSG5Q15238 335 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CYTH1Q15438 398 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 IL17AQ16552 155 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RPEL1Q2QD12 228 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CDKL4Q5MAI5 379 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 Q6ZT83 130 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 LRRC52Q8N7C0 313 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CDRT4Q8N9R6 151 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF248Q8NDW4 579 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 BPIFCQ8NFQ6 507 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 OR4A15Q8NGL6 344 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PHF10Q8WUB8 498 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 DYNLL2Q96FJ2 89 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RNF185Q96GF1 192 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PLEKHA8Q96JA3 519 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RNF170Q96K19 258 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF681Q96N22 645 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TSNAXQ99598 290 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 C11orf70Q9BRQ4 267 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PELOQ9BRX2 385 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 NAT9Q9BTE0 207 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 KIR3DX1Q9H7L2 352 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 PATZ1Q9HBE1 687 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TREM1Q9NP99 234 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 TIGARQ9NQ88 270 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 CALYQ9NYX4 217 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 STX18Q9P2W9 335 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 HMGXB4Q9UGU5 601 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 RBMX2Q9Y388 322 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 MOB4Q9Y3A3 225 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 MTCL1Q9Y4B5 1905 aaKnown RBP0.71□□□□□ -2.3
HIF1A-204ENST00000539097 A0A1W2PP64 1363 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FAT3Q8TDW7 4589 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZBED9Q6R2W3 1325 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 AKAP11Q9UKA4 1901 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ATRNO75882 1429 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 KCPQ6ZWJ8 1503 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 PSMD11O00231 422 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SHOX2O60902 331 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CTNSO60931 367 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 HLA-AP01891 365 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CRHP06850 196 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 NELFEP18615 380 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 FUT3P21217 361 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 OR1E1P30953 314 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 CASP14P31944 242 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 GPX4P36969 197 aaPredicted RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TMED10P49755 219 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 SLC25A1P53007 311 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TSPAN5P62079 268 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 RANP62826 216 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 BASP1P80723 227 aaKnown RBP0.7□□□□□ -2.3
HIF1A-204ENST00000539097 TGFBR3Q03167 851 aa0.7□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF33AQ06730 810 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms