RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PTAFRP25105 342 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 RPS19P39019 145 aaKnown RBP13.32□□□□□ -0.28
VAMP1-207ENST00000539047 WNT5AP41221 380 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 GSK3AP49840 483 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 UCP2P55851 309 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF92Q03936 586 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF404Q494X3 552 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 CEP78Q5JTW2 689 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 GLT8D1Q68CQ7 371 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 MZT2AQ6P582 158 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 PAQR4Q8N4S7 273 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-207ENST00000539047 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 OR14K1Q8NGZ2 314 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 MCFD2Q8NI22 146 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 LYZL4Q96KX0 146 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 TECTBQ96PL2 329 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 ZCCHC4Q9H5U6 513 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 KCNN3Q9UGI6 736 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 BSNQ9UPA5 3926 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 POLEQ07864 2286 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 NOTOA8MTQ0 251 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 PIN1P1O15428 100 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 SULT1B1O43704 296 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 MAS1P04201 325 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF35P13682 527 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 FAHP16930 419 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 GCH1P30793 250 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 DDOSTP39656 456 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 MAGEB1P43366 347 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 GK2Q14410 553 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-207ENST00000539047 CNN3Q15417 329 aaKnown RBP13.31□□□□□ -0.28
VAMP1-207ENST00000539047 OR8B8Q15620 311 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 Q6ZSR3 168 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 MYPOPQ86VE0 399 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF101Q8IZC7 436 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 OR1M1Q8NGA1 313 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 FOXRED1Q96CU9 486 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-207ENST00000539047 TSC22D3Q99576 134 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
VAMP1-207ENST00000539047 TMEM138Q9NPI0 162 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 STARD10Q9Y365 291 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 A3GALT2U3KPV4 340 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 V9GY05 133 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
VAMP1-207ENST00000539047 SMIM30A4D0T7 59 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ANKRD61A6NGH8 418 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ANKRD30BLA7E2S9 258 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ZG16O60844 167 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 CLPXO76031 633 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 NGFP01138 241 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 HCKP08631 526 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 BDKRB2P30411 391 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 S100A5P33763 92 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 FAM3AP98173 230 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ZNF718Q3SXZ3 478 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 CLVS2Q5SYC1 327 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 SEZ6L2Q6UXD5 910 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 FBXW12Q6X9E4 464 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 OR13C9Q8NGT0 318 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ACOT12Q8WYK0 555 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 KCTD12Q96CX2 325 aaKnown RBP13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ADAT3Q96EY9 351 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-207ENST00000539047 RADILQ96JH8 1075 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
VAMP1-207ENST00000539047 CHST5Q9GZS9 411 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 C6orf62Q9GZU0 229 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-207ENST00000539047 PPIL3Q9H2H8 161 aaKnown RBP13.3□□□□□ -0.28
VAMP1-207ENST00000539047 MMP27Q9H306 513 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 PLGRKTQ9HBL7 147 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 ABCB9Q9NP78 766 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
VAMP1-207ENST00000539047 AK6Q9Y3D8 172 aaKnown RBP13.3□□□□□ -0.28
VAMP1-207ENST00000539047 TRAV8-7A0A075B6U6 113 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 C5orf63A6NC05 138 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 TUBAL3A6NHL2 446 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 LMX1BO60663 402 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 CLEC2LP0C7M8 214 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 RAC2P15153 192 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 PRKACBP22694 351 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 CD40P25942 277 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 CAPZA1P52907 286 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 SELENOVP59797 346 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 SNTB2Q13425 540 aaKnown RBP13.29□□□□□ -0.28
VAMP1-207ENST00000539047 SPATA46Q5T0L3 261 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 DDI2Q5TDH0 399 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 RGS7BPQ6MZT1 257 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-207ENST00000539047 UTS2BQ765I0 119 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 PNLDC1Q8NA58 520 aaKnown RBP13.29□□□□□ -0.28
VAMP1-207ENST00000539047 OR56B2PQ8NGI1 322 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 ORAI1Q96D31 301 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 PAPOLGQ9BWT3 736 aaKnown RBP13.29□□□□□ -0.28
VAMP1-207ENST00000539047 DAPK2Q9UIK4 370 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 ADAM30Q9UKF2 790 aa13.29□□□□□ -0.28
VAMP1-207ENST00000539047 SLC7A11Q9UPY5 501 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms