RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 ADIPOQQ15848 244 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HIST2H3PS2Q5TEC6 136 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 DEGS2Q6QHC5 323 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 KCTD8Q6ZWB6 473 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HIST2H3AQ71DI3 136 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF367Q7RTV3 350 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 GLCCI1Q86VQ1 547 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 SPARTQ8N0X7 666 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 NANOGP1Q8N7R0 232 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HAVCR2Q8TDQ0 301 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 GATAD2BQ8WXI9 593 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 RORBQ92753 470 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 MRPL24Q96A35 216 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 TMEM186Q96B77 213 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 JMJD8Q96S16 334 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 KCNJ15Q99712 375 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 WNT5BQ9H1J7 359 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 BRD7Q9NPI1 651 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 HIF1ANQ9NWT6 349 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 ZNF224Q9NZL3 707 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 N6AMT1Q9Y5N5 214 aa10.65□□□□□ -0.7
CLSTN3-208ENST00000538933 C5orf49A4QMS7 147 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 LOC110117498-PIK3R3F6TDL0 507 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 M0R135 149 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 SYNGR3O43761 229 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 SERPINA5P05154 406 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ANXA2P07355 339 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ADRA2AP08913 450 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 EPHA1P21709 976 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 OPRL1P41146 370 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 CX3CR1P49238 355 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 TAS2R43P59537 309 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ROM1Q03395 351 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 EMX1Q04741 257 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 FOXL1Q12952 345 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 IRF3Q14653 427 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 SPHARQ15513 63 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ARL9Q6T311 187 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 RHOUQ7L0Q8 258 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 KLBQ86Z14 1044 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ZCCHC24Q8N2G6 241 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 SLC30A7Q8NEW0 376 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 OR10S1Q8NGN2 331 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ZNF799Q96GE5 643 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 SP140LQ9H930 580 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ISG20L2Q9H9L3 353 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 NOX3Q9HBY0 568 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ACOT13Q9NPJ3 140 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 DDX28Q9NUL7 540 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ACOXLQ9NUZ1 547 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 B3GNT2Q9NY97 397 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 MRM2Q9UI43 246 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 ATPIF1Q9UII2 106 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 GRIP1Q9Y3R0 1128 aa10.64□□□□□ -0.71
CLSTN3-208ENST00000538933 TMEM269A0A1B0GVZ9 245 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 LYNX1G3V0Z9 82 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 TBX1O43435 398 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 OR4A8P0C604 315 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 LYNX1P0DP58 116 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 PSMB10P40306 273 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 PSMA6P60900 246 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 UNQ6126/PRO20091Q6UXV3 157 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 COMMD2Q86X83 199 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 CPEB3Q8NE35 698 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 NEU4Q8WWR8 484 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 SLC7A6Q92536 515 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 PGAM5Q96HS1 289 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 SIGLEC11Q96RL6 698 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 DCLRE1CQ96SD1 692 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 DOK1Q99704 481 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 RAB1BQ9H0U4 201 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 CA10Q9NS85 328 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 BABAM2Q9NXR7 383 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 R4GMQ9 66 aa10.63□□□□□ -0.71
CLSTN3-208ENST00000538933 PNMA8CA0A1B0GUJ8 204 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 PRR32B1ATL7 298 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 ABHD16AO95870 558 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 IGKV3-15P01624 115 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 CRYAAP02489 173 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 LCATP04180 440 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 LCKP06239 509 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 CELA3BP08861 270 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 DBHP09172 617 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 CCL2P13500 99 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 UBA52P62987 128 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 TIGD6Q17RP2 521 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 BCL2L15Q5TBC7 163 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 DRAM2Q6UX65 266 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 EGFL6Q8IUX8 553 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 FAM169BQ8N8A8 192 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 IL17RDQ8NFM7 739 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 UFD1Q92890 307 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 PELI1Q96FA3 418 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 OR5M11Q96RB7 305 aa10.62□□□□□ -0.71
CLSTN3-208ENST00000538933 ZNF649Q9BS31 505 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms