RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 FAM166AQ6J272 317 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 ZNF322Q6U7Q0 402 aaPredicted RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 KRT77Q7Z794 578 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 PRIMA1Q86XR5 153 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 ENTHD1Q8IYW4 607 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 SPERTQ8NA61 448 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 OR2T27Q8NH04 317 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 SPRYD4Q8WW59 207 aaPredicted RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 MROQ9BYG7 248 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 TLNRD1Q9H1K6 362 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 OR10A2Q9H208 303 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 MRPS18AQ9NVS2 196 aaKnown RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 TREM2Q9NZC2 230 aa11.52□□□□□ -0.57
CD9-208ENST00000538834 EXOGQ9Y2C4 368 aaKnown RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 NOP16Q9Y3C1 178 aaKnown RBP11.52□□□□□ -0.57
CD9-208ENST00000538834 FBN1P35555 2871 aaKnown RBP11.51□□□□□ -0.57
CD9-208ENST00000538834 TMEM269A0A1B0GVZ9 245 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 A0A1W2PQL4 384 aaPredicted RBP11.51□□□□□ -0.57
CD9-208ENST00000538834 GGT3PA6NGU5 568 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 ENTPD6O75354 484 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 LHBP01229 141 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 TTRP02766 147 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 ANPEPP15144 967 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 CPT2P23786 658 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 CFHR2P36980 270 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 ZNF85Q03923 595 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 MPPED2Q15777 294 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 WDR86Q86TI4 376 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 CSNK2A3Q8NEV1 391 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 ZNF420Q8TAQ5 688 aaPredicted RBP11.51□□□□□ -0.57
CD9-208ENST00000538834 RFKQ969G6 155 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 PPP1R14AQ96A00 147 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 ITPKCQ96DU7 683 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 PGAM5Q96HS1 289 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 APOL4Q9BPW4 351 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 FGF23Q9GZV9 251 aaPredicted RBP11.51□□□□□ -0.57
CD9-208ENST00000538834 PPP1R3EQ9H7J1 279 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
CD9-208ENST00000538834 TMEM165Q9HC07 324 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 DNAJC27Q9NZQ0 273 aa11.51□□□□□ -0.57
CD9-208ENST00000538834 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 PPIAL4CA0A0B4J2A2 164 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 A0A1B0GTI1 187 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 LOC100130705A0A1B0GUX0 176 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 A8MXK9 166 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 PSMD9O00233 223 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 MAGEB4O15481 346 aaPredicted RBP11.5□□□□□ -0.57
CD9-208ENST00000538834 TBX1O43435 398 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 SULT1C4O75897 302 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 TGFAP01135 160 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 MSMBP08118 114 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 PPIAL4FP0DN26 164 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 ATP6V1B1P15313 513 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 CCL1P22362 96 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 RIDAP52758 137 aaKnown RBP11.5□□□□□ -0.57
CD9-208ENST00000538834 BTG1P62324 171 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 MFGE8Q08431 387 aaPredicted RBP11.5□□□□□ -0.57
CD9-208ENST00000538834 OR8G1Q15617 311 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 TIGD6Q17RP2 521 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 EGFL6Q8IUX8 553 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 ELMOD2Q8IZ81 293 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 PACRGLQ8N7B6 248 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 OR51G2Q8NGK0 314 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 APH1BQ8WW43 257 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 DACT3Q96B18 629 aaPredicted RBP11.5□□□□□ -0.57
CD9-208ENST00000538834 ADAT1Q9BUB4 502 aaKnown RBP11.5□□□□□ -0.57
CD9-208ENST00000538834 PBOV1Q9GZY1 135 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 C8orf4Q9NR00 106 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.5□□□□□ -0.57
CD9-208ENST00000538834 RHBDD3Q9Y3P4 386 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 ORC6Q9Y5N6 252 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 R4GMQ9 66 aa11.5□□□□□ -0.57
CD9-208ENST00000538834 ZNF670-ZNF695F2Z2N8 137 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 FAM20BO75063 409 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 WNT2P09544 360 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 THBS2P35442 1172 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 MTNR1AP48039 350 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 ADARB1P78563 741 aaKnown RBP11.49□□□□□ -0.57
CD9-208ENST00000538834 PAX2Q02962 417 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 ZNF404Q494X3 552 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 CDONQ4KMG0 1287 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 ZBTB37Q5TC79 503 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 OGFRL1Q5TC84 451 aaPredicted RBP11.49□□□□□ -0.57
CD9-208ENST00000538834 TMEM42Q69YG0 159 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 FDX2Q6P4F2 183 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 TMEM186Q96B77 213 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 RAB39BQ96DA2 213 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 MOB1AQ9H8S9 216 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 BRD7Q9NPI1 651 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 AASSQ9UDR5 926 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
CD9-208ENST00000538834 KCNS2Q9ULS6 477 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms