RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SPNS3Q6ZMD2 512 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SUMF2Q8NBJ7 301 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 PTPMT1Q8WUK0 201 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 LRRC29Q8WV35 223 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 C17orf50Q8WW18 174 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 GATA6Q92908 595 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ZG16BQ96DA0 208 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 WDR34Q96EX3 536 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 GINS3Q9BRX5 216 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 JAM3Q9BX67 310 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 C20orf85Q9H1P6 137 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 HSPB2A8KAH6 182 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 CCSO14618 274 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SULT1C4O75897 302 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 MPZL1O95297 269 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ZNF26P17031 533 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 RAB4AP20338 218 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 DUSP1P28562 367 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 WNT3P56703 355 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 HSPB2Q16082 182 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 C2orf76Q3KRA6 126 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 C1orf185Q5T7R7 199 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR10K2Q6IF99 312 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SMIM15Q7Z3B0 74 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 C10orf90Q96M02 699 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 TRPM6Q9BX84 2022 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 NEU3Q9UQ49 428 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR2M5A3KFT3 312 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 TMEM235A6NFC5 223 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 NUDT19A8MXV4 375 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 CTXN2P0C2S0 81 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR10J4P0C629 311 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 CASP3P42574 277 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 FUT7Q11130 342 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 TATDN3Q17R31 274 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SH2D5Q6ZV89 423 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ZNF441Q8N8Z8 693 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 CMTM2Q8TAZ6 248 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SAP25Q8TEE9 199 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ABHD3Q8WU67 409 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 PHYHIPQ92561 330 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 GALMQ96C23 342 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 DOK1Q99704 481 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 METTL17Q9H7H0 456 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 LPAR2Q9HBW0 351 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 KLK4Q9Y5K2 254 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 TMEM129A0AVI4 362 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ASPDHA6ND91 283 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 B4E171 279 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SCAF4O95104 1147 aaKnown RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 THBS4P35443 961 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 TSPAN7P41732 249 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 THBS3P49746 956 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 DLX5P56178 289 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 MLF1P58340 268 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 TAS2R30P59541 319 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 CDC20Q12834 499 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 PRDX4Q13162 271 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 SSX2Q16385 188 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 C17orf78Q8N4C9 275 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR10AD1Q8NGE0 317 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR6K3Q8NGY3 331 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR4Q3Q8NH05 313 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 MTCH1Q9NZJ7 389 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 MGST1P10620 155 aaKnown RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 RPS19P39019 145 aaKnown RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 ELLP55199 621 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 STAC2Q6ZMT1 411 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 NOXA1Q86UR1 476 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 KLHDC8BQ8IXV7 354 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 LGI3Q8N145 548 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ADPRHL1Q8NDY3 354 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OR13G1Q8NGZ3 307 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ZNF251Q9BRH9 671 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 GLRX2Q9NS18 164 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 DVL1O14640 695 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 DVL1P1P54792 670 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 SLC35A2P78381 396 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 RIMKLAQ8IXN7 391 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 OTOSQ8NHW6 89 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 NUDCD2Q8WVJ2 157 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 ZNF501Q96CX3 271 aaPredicted RBP4.79□□□□□ -1.64
LRP6-203ENST00000538239 PELI1Q96FA3 418 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 WDR54Q9H977 334 aa4.79□□□□□ -1.64
LRP6-203ENST00000538239 IGHV1-45A0A0A0MS14 117 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ZNF701M0R085 212 aaPredicted RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 GP1BAP07359 652 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 IAPPP10997 89 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 RPS2P15880 293 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 ELK1P19419 428 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 PSMB1P20618 241 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 FCGR2CP31995 323 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR3A4PP47883 348 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 NPBWR1P48145 328 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ASCL1P50553 236 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 GNG3P63215 75 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 CD226Q15762 336 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms