RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 KLK13Q9UKR3 277 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 ELF5Q9UKW6 265 aaPredicted RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 ANAPC10Q9UM13 185 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SDK2Q58EX2 2172 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 IGKV3D-15A0A087WSY6 115 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 IGHV3-15A0A0B4J1V0 119 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 MEIS3P1A6NDR6 274 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OR6C6A6NF89 314 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 ZNF716A6NP11 495 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 C9orf172C9J069 976 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 G3V3Y1 287 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 L7N2F9 121 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 CDC14BO60729 498 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 NOS1APO75052 506 aaPredicted RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 TSC22D2O75157 780 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 TRAPPC6AO75865 159 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 HPNP05981 417 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OR4E1P0C645 316 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 VSIG10L2P0DP72 767 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 CD59P13987 128 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 HIST1H1DP16402 221 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 PRKACBP22694 351 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 CPT2P23786 658 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 CD82P27701 267 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 AGTR1P30556 359 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 DLSTP36957 453 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 ECI1P42126 302 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 SELENOPP49908 381 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 GFRA1P56159 465 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 TAS2R46P59540 309 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 RAB14P61106 215 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 RPS18P62269 152 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 SNRPD2P62316 118 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 RPS27AP62979 156 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 Q0VFX4 171 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 LPAL2Q16609 132 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 GFOD2Q3B7J2 385 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 CDNFQ49AH0 187 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 VAX1Q5SQQ9 334 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 ZNF468Q5VIY5 522 aaPredicted RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 TCEAL6Q6IPX3 200 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 LIN54Q6MZP7 749 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 TEX261Q6UWH6 196 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 AAED1Q7RTV5 226 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 TIPARPQ7Z3E1 657 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 YRDCQ86U90 279 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 TMEM17Q86X19 198 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 LURAP1LQ8IV03 231 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 ZNF100Q8IYN0 542 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 PAQR4Q8N4S7 273 aaPredicted RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 C12orf45Q8N5I9 185 aaPredicted RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 ZIC4Q8N9L1 334 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 SEMA6DQ8NFY4 1073 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OR4D10Q8NGI6 311 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OR8S1Q8NH09 359 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OR10D3Q8NH80 312 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OR1F12Q8NHA8 337 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 SSC4DQ8WTU2 575 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 TCEAL3Q969E4 200 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 THOC3Q96J01 351 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 ADGRG7Q96K78 797 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 FER1L6-AS2Q96M78 137 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 NECAB3Q96P71 396 aaPredicted RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 FOXB1Q99853 325 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 LINC00470Q9BZP3 86 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 LPAR5Q9H1C0 372 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 POFUT1Q9H488 388 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 SMOC1Q9H4F8 434 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 RNF122Q9H9V4 155 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 TMEM9BQ9NQ34 198 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 PCDHB16Q9NRJ7 776 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 PARPBPQ9NWS1 579 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 LRFN1Q9P244 771 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 OPN4Q9UHM6 478 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 MCTS1Q9ULC4 181 aaKnown RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 KLF13Q9Y2Y9 288 aaPredicted RBP5.83□□□□□ -1.48
USP28-206ENST00000538224 MAB21L2Q9Y586 359 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 U3KQ87 197 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 ALPK2Q86TB3 2170 aa5.83□□□□□ -1.48
USP28-206ENST00000538224 DOCK10Q96BY6 2186 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 A0A1B0GW55 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 PLSCR5A0PG75 271 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 ANKRD34BA5PLL1 514 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 OR5H15A6NDH6 313 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SERPINE3A8MV23 424 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 F5H5K5 113 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 STMND1H3BQB6 276 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 M0QYG6 137 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 GOSR2O14653 212 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 AKR7A2O43488 359 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 XRCC2O43543 280 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CXCL13O43927 109 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 RP2O75695 350 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 CRTAPO75718 401 aaPredicted RBP5.82□□□□□ -1.48
USP28-206ENST00000538224 SLC22A5O76082 557 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 SYNGR4O95473 234 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 MPIG6BO95866 241 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 MT-CO3P00414 261 aa5.82□□□□□ -1.48
USP28-206ENST00000538224 FCER2P06734 321 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms