RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PCDHGA1Q9Y5H4 931 aa8.17□□□□□ -1.1
UBE3B-207ENST00000537063 TMEM82A0PJX8 343 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 LINC01387J3KSC0 135 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 MPC2O95563 127 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
UBE3B-207ENST00000537063 CARD18P57730 90 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 RIPPLY2Q5TAB7 128 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 GLIPR1L1Q6UWM5 242 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 SLC16A14Q7RTX9 510 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 NAA40Q86UY6 237 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 PP6455Q8WZ26 134 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 TMEM45BQ96B21 275 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 PGAM5Q96HS1 289 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 CHST6Q9GZX3 395 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 EXO5Q9H790 373 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 ZMAT3Q9HA38 289 aaKnown RBP8.16□□□□□ -1.1
UBE3B-207ENST00000537063 CYTIPO60759 359 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 AMY2AP04746 511 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 TMEM104Q8NE00 496 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 ZNF680Q8NEM1 530 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 PRRT1Q99946 306 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 NICN1Q9BSH3 213 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 CCDC187A0A096LP49 1063 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 OR6C6A6NF89 314 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 DISC1C4P0D8 188 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 M0R135 149 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 NEURL1O76050 574 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 RLN1P04808 185 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 OR4E1P0C645 316 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 JMJD7P0C870 316 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 FAM189A2Q15884 450 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 PNLIPRP3Q17RR3 467 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 COMMD2Q86X83 199 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 BPIFB2Q8N4F0 458 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 ZDHHC22Q8N966 263 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 OR10D3Q8NH80 312 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
UBE3B-207ENST00000537063 ZNF799Q96GE5 643 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 GAL3ST1Q99999 423 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 RBM24Q9BX46 236 aaKnown RBP8.16□□□□□ -1.1
UBE3B-207ENST00000537063 EIF3KQ9UBQ5 218 aaKnown RBP8.16□□□□□ -1.1
UBE3B-207ENST00000537063 KCNK7Q9Y2U2 307 aa8.16□□□□□ -1.1
UBE3B-207ENST00000537063 IGKV3D-15A0A087WSY6 115 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 HMSDA8MTL9 139 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 MFNGO00587 321 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 HPNP05981 417 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 HIST1H1DP16402 221 aaKnown RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 GNB3P16520 340 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 GNG2P59768 71 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 WIPI1Q5MNZ9 446 aaPredicted RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 DRAM2Q6UX65 266 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 RTN4RL2Q86UN3 420 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 FTMTQ8N4E7 242 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 SPTSSAQ969W0 71 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 SFXN2Q96NB2 322 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 ZNF703Q9H7S9 590 aaPredicted RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 ZDBF2Q9HCK1 2354 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 LINC00862A6NCI5 91 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 CXCL13O43927 109 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 SLC22A5O76082 557 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 IL2RAP01589 272 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 CXCL2P19875 107 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 ZNF81P51508 661 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 TSPAN5P62079 268 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 RPS27AP62979 156 aaKnown RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 STK11Q15831 433 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 LRRC18Q8N456 261 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 OR4S1Q8NGB4 309 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 OR52H1Q8NGJ2 320 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 NKD1Q969G9 470 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 CPNE4Q96A23 557 aaPredicted RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 THOC3Q96J01 351 aaKnown RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 SPACA5Q96QH8 159 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 CHIAQ9BZP6 476 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 BOKQ9UMX3 212 aaPredicted RBP8.15□□□□□ -1.1
UBE3B-207ENST00000537063 VSIG4Q9Y279 399 aa8.15□□□□□ -1.1
UBE3B-207ENST00000537063 CEACAM18A8MTB9 384 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 F5H5P2 479 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 CD96P40200 585 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 TMEM50BP56557 158 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 KISS1Q15726 138 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 UBE2V2Q15819 145 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 NRN1LQ496H8 165 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 RNASE10Q5GAN6 216 aaKnown RBP8.15□□□□□ -1.11
UBE3B-207ENST00000537063 LY6G6FQ5SQ64 297 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 C6orf183Q5T699 404 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 FAHD2BQ6P2I3 314 aaPredicted RBP8.15□□□□□ -1.11
UBE3B-207ENST00000537063 SLC25A42Q86VD7 318 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 GVQW1Q8N7I0 195 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 OR2M7Q8NG81 312 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 OR8H1Q8NGG4 311 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 FAHD2AQ96GK7 314 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 FAM173AQ9BQD7 235 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 TM2D1Q9BX74 207 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 TMEM59Q9BXS4 323 aa8.15□□□□□ -1.11
UBE3B-207ENST00000537063 RPS10-NUDT3A0A1W2PQS6 291 aa8.14□□□□□ -1.11
UBE3B-207ENST00000537063 HCKP08631 526 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms